Pavir.J07154 (Panicum virgatum)
NFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01422 (zf-NF-X1) IPR000967 Pavir.J07154 T300985_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J07154.1.p NFX 195 228
Pavir.J07154.1.p NFX 264 282
Pavir.J07154.1.p NFX 317 335
Pavir.J07154.1.p NFX 371 390
Pavir.J07154.1.p NFX 424 442
Pavir.J07154.1.p NFX 451 469
Pavir.J07154.1.p NFX 514 528
Pavir.J07154.1.p NFX 537 548
Pavir.J07154.1.p NFX 619 630
Pavir.J07154.1.p NFX 669 688

Links

Other NFX family TFs
Other Panicum virgatum TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G139369 Zea mays GRMZM2G139369 N 0.965
Sb03g005310 Sorghum bicolor Sb03g005310 N 0.965
Si000223m.g Setaria italica Si000223m.g N 0.870
Traes_3AS_496047B73 Triticum aestivum Traes_3AS_496047B73 N 0.834
MLOC_4879 Hordeum vulgare MLOC_4879 N 0.824
Gorai.010G197800 Gossypium raimondii Gorai.010G197800 N 0.787
ATNFXL2 Vitis vinifera VIT_13s0067g00920 N 0.781
Eucgr.J00206 Eucalyptus grandis Eucgr.J00206 N 0.778
TCM_042496 Theobroma cacao TCM_042496 N 0.778
Ca_13412 Cicer arietinum Ca_13412 N 0.775
evm.TU.supercontig_19.173 Carica papaya evm.TU.supercontig_19.173 N 0.772
Solyc06g051570.2 Solanum lycopersicum Solyc06g051570.2 N 0.751
OB01G13760 Oryza brachyantha OB01G13760 N 0.746
BGIOSGA002351 Oryza indica BGIOSGA002351 N 0.740
ORUFI01G03990 Oryza rufipogon ORUFI01G03990 N 0.740
POPTR_0010s19600 Populus trichocarpa POPTR_0010s19600 N 0.740
OS01G0158900 Oryza sativa OS01G0158900 N 0.740
OGLUM01G04180 Oryza glumaepatula OGLUM01G04180 N 0.740
OBART01G03880 Oryza barthii OBART01G03880 N 0.740
ORGLA01G0034200 Oryza glaberrima ORGLA01G0034200 N 0.740
OLONG_021562 Oryza longistaminata OLONG_021562 N 0.740
LPERR01G03530 Leersia perrieri LPERR01G03530 N 0.740
ONIVA01G04320 Oryza nivara ONIVA01G04320 N 0.740
Aquca_045_00093 Aquilegia coerulea Aquca_045_00093 N 0.730
GLYMA18G03080 Glycine max GLYMA18G03080 N 0.728
GSMUA_Achr2G18970_001 Musa acuminata GSMUA_Achr2G18970_001 N 0.728
OPUNC01G03540 Oryza punctata OPUNC01G03540 N 0.728
Bra009123 Brassica rapa Bra009123 N 0.716
Bo9g177030 Brassica oleracea Bo9g177030 N 0.716
Cucsa.136670 Cucumis sativus Cucsa.136670 N 0.714
cassava20878.m1 Manihot esculenta cassava20878.m1 N 0.704
OMERI01G03770 Oryza meridionalis OMERI01G03770 N 0.704
PRUPE_ppa001277mg Prunus persica PRUPE_ppa001277mg N 0.701
Pm018929 Prunus mume Pm018929 N 0.701
mgf001689m Mimulus guttatus mgf001689m N 0.700