TCM_042496 (Theobroma cacao)
NFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01422 (zf-NF-X1) IPR000967 TCM_042496 T300826_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY17775 NFX 193 210
EOY17775 NFX 245 263
EOY17775 NFX 298 316
EOY17775 NFX 352 371
EOY17775 NFX 405 423
EOY17775 NFX 432 450
EOY17775 NFX 497 509
EOY17775 NFX 518 529
EOY17775 NFX 600 611
EOY17775 NFX 643 660
EOY17776 NFX 185 202
EOY17776 NFX 237 255
EOY17776 NFX 290 308
EOY17776 NFX 344 363
EOY17776 NFX 397 415
EOY17776 NFX 424 442
EOY17776 NFX 489 501
EOY17776 NFX 510 521
EOY17776 NFX 592 603
EOY17776 NFX 635 652
EOY17777 NFX 185 202
EOY17777 NFX 237 255
EOY17777 NFX 290 308
EOY17777 NFX 344 363
EOY17777 NFX 397 415
EOY17777 NFX 424 442
EOY17777 NFX 489 501
EOY17777 NFX 510 521
EOY17777 NFX 592 603
EOY17777 NFX 635 652

Links

Other NFX family TFs
Other Theobroma cacao TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.010G197800 Gossypium raimondii Gorai.010G197800 N 0.952
Solyc06g051570.2 Solanum lycopersicum Solyc06g051570.2 N 0.838
Eucgr.J00206 Eucalyptus grandis Eucgr.J00206 N 0.838
evm.TU.supercontig_19.173 Carica papaya evm.TU.supercontig_19.173 N 0.838
ATNFXL2 Vitis vinifera VIT_13s0067g00920 N 0.826
Ca_13412 Cicer arietinum Ca_13412 N 0.790
Pavir.J07154 Panicum virgatum Pavir.J07154 N 0.778
GRMZM2G139369 Zea mays GRMZM2G139369 N 0.772
Aquca_045_00093 Aquilegia coerulea Aquca_045_00093 N 0.757
POPTR_0010s19600 Populus trichocarpa POPTR_0010s19600 N 0.754
SapurV1A.0061s0270 Salix purpurea SapurV1A.0061s0270 N 0.754
Sb03g005310 Sorghum bicolor Sb03g005310 N 0.751
GLYMA18G03080 Glycine max GLYMA18G03080 N 0.743
Cucsa.136670 Cucumis sativus Cucsa.136670 N 0.741
cassava20878.m1 Manihot esculenta cassava20878.m1 N 0.737
Bo9g177030 Brassica oleracea Bo9g177030 N 0.731
Bra009123 Brassica rapa Bra009123 N 0.731
PRUPE_ppa001277mg Prunus persica PRUPE_ppa001277mg N 0.727
Pm018929 Prunus mume Pm018929 N 0.727
mgf001689m Mimulus guttatus mgf001689m N 0.726
NFXL2 Arabidopsis thaliana AT5G05660 N 0.723
Si000223m.g Setaria italica Si000223m.g N 0.719
Cagra.1504s0067 Capsella grandiflora Cagra.1504s0067 N 0.719
Carubv10003051m.g Capsella rubella Carubv10003051m.g N 0.719
Thhalv10012642m.g Eutrema salsugineum Thhalv10012642m.g N 0.717
GSMUA_Achr2G18970_001 Musa acuminata GSMUA_Achr2G18970_001 N 0.713
MTR_3g070780 Medicago truncatula MTR_3g070780 N 0.701