CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10012642m.g
(
Eutrema salsugineum
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01422 (zf-NF-X1)
IPR000967
Thhalv10012642m.g
T300991_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10012642m
NFX
197
214
CGHCCLLLCHPGPCASCP
Thhalv10012642m
NFX
232
267
CGHKLFSCGKVCNRVLDCDIHKCREICHDGECPPCR
Thhalv10012642m
NFX
302
320
CGKHVCERGCHSGECGLCP
Thhalv10012642m
NFX
356
375
CGYHRCPERCHRGPCLETCR
Thhalv10012642m
NFX
409
427
CARHACRRRCCDGECPPCS
Thhalv10012642m
NFX
430
454
CGKKLPCRNHKCQSPCHQGLCAPCP
Thhalv10012642m
NFX
501
513
PHKCHYGACPPCR
Thhalv10012642m
NFX
522
533
CGHKCKLRCHGP
Thhalv10012642m
NFX
604
615
CGNHYCSFTCHP
Thhalv10012642m
NFX
645
662
CQHPCPRRCHPEDCPPCK
Thhalv10012642m
NFX
708
727
CTHLCPEICHPGQCPSPEKC
Links
Other
NFX
family TFs
Other
Eutrema salsugineum
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.1504s0067
Capsella grandiflora
Cagra.1504s0067
N
0.973
Carubv10003051m.g
Capsella rubella
Carubv10003051m.g
N
0.973
NFXL2
Arabidopsis thaliana
AT5G05660
N
0.962
Cucsa.136670
Cucumis sativus
Cucsa.136670
N
0.842
Aquca_045_00093
Aquilegia coerulea
Aquca_045_00093
N
0.832
PRUPE_ppa001277mg
Prunus persica
PRUPE_ppa001277mg
N
0.821
cassava20878.m1
Manihot esculenta
cassava20878.m1
N
0.821
Pm018929
Prunus mume
Pm018929
N
0.815
mgf001689m
Mimulus guttatus
mgf001689m
N
0.799
Traes_3AS_496047B73
Triticum aestivum
Traes_3AS_496047B73
N
0.772
MLOC_4879
Hordeum vulgare
MLOC_4879
N
0.766
Ca_13412
Cicer arietinum
Ca_13412
N
0.766
Bo9g177030
Brassica oleracea
Bo9g177030
N
0.750
Bra009123
Brassica rapa
Bra009123
N
0.750
evm.TU.supercontig_19.173
Carica papaya
evm.TU.supercontig_19.173
N
0.745
Eucgr.J00206
Eucalyptus grandis
Eucgr.J00206
N
0.739
Gorai.010G197800
Gossypium raimondii
Gorai.010G197800
N
0.739
ATNFXL2
Vitis vinifera
VIT_13s0067g00920
N
0.734
SELMODRAFT_510
Selaginella moellendorffii
SELMODRAFT_510
N
0.723
TCM_042496
Theobroma cacao
TCM_042496
N
0.717
Bostr.13129s0405
Boechera stricta
Bostr.13129s0405
N
0.709
ATNFXL2
Arabidopsis lyrata
fgenesh2_kg.6__500__AT5G05660.1
N
0.708
Solyc06g051570.2
Solanum lycopersicum
Solyc06g051570.2
N
0.701