CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bcin05g05530
(
Botrytis cinerea
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
Bcin05g05530
T191777_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-2
M02016_2.00
Neurospora crassa
NNHGATNNN
NNNATCDNN
PBM
Weirauch et al.(2014)
pTH8611
0.847
0.889
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bcin05g05530.1
GATA
454
489
CADCGVMDSPEWRKGPKGPKTLCNACGLRWAKKEKK
Links
Other
GATA
family TFs
Other
Botrytis cinerea
TFs
146 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_009_00966
Aquilegia coerulea
Aquca_009_00966
I
BGIOSGA018048
Oryza indica
BGIOSGA018048
I
BGIOSGA029518
Oryza indica
BGIOSGA029518
N
BRADI1G52480
Brachypodium distachyon
BRADI1G52480
N
BRADI4G34022
Brachypodium distachyon
BRADI4G34022
I
BRADI4G37327
Brachypodium distachyon
BRADI4G37327
I
F775_23543
Aegilops tauschii
F775_23543
I
GRMZM2G004531
Zea mays
GRMZM2G004531
N
GRMZM2G163914
Zea mays
GRMZM2G163914
N
GRMZM2G459156
Zea mays
GRMZM2G459156
N
GSMUA_Achr3G00330_001
Musa acuminata
GSMUA_Achr3G00330_001
I
LPERR05G13140
Leersia perrieri
LPERR05G13140
I
mgf004020m
Mimulus guttatus
mgf004020m
I
mgf015836m
Mimulus guttatus
mgf015836m
I
MLOC_75297
Hordeum vulgare
MLOC_75297
N
MTR_5g069030
Medicago truncatula
MTR_5g069030
I
NAC026
Arabidopsis thaliana
AT1G62700
I
OBART05G16540
Oryza barthii
OBART05G16540
I
OBART09G15000
Oryza barthii
OBART09G15000
N
OGLUM05G17550
Oryza glumaepatula
OGLUM05G17550
I
OGLUM09G15640
Oryza glumaepatula
OGLUM09G15640
N
OMERI09G11680
Oryza meridionalis
OMERI09G11680
N
ONIVA05G17220
Oryza nivara
ONIVA05G17220
I
ONIVA09G15620
Oryza nivara
ONIVA09G15620
N
OPUNC05G14600
Oryza punctata
OPUNC05G14600
I
OPUNC09G13450
Oryza punctata
OPUNC09G13450
N
ORGLA05G0143100
Oryza glaberrima
ORGLA05G0143100
I
ORGLA09G0115600
Oryza glaberrima
ORGLA09G0115600
N
ORUFI05G17750
Oryza rufipogon
ORUFI05G17750
I
ORUFI09G16180
Oryza rufipogon
ORUFI09G16180
N
OS05G0415400
Oryza sativa
OS05G0415400
I
OS09G0493700
Oryza sativa
OS09G0493700
N
Pavir.Ba01681
Panicum virgatum
Pavir.Ba01681
N
Pavir.Ia03443
Panicum virgatum
Pavir.Ia03443
I
Pavir.Ib01528
Panicum virgatum
Pavir.Ib01528
I
Pavir.J04800
Panicum virgatum
Pavir.J04800
N
Pm019659
Prunus mume
Pm019659
I
PRUPE_ppa017765mg
Prunus persica
PRUPE_ppa017765mg
I
PRUPE_ppa022384mg
Prunus persica
PRUPE_ppa022384mg
I
Sb02g028750
Sorghum bicolor
Sb02g028750
N
Sb03g000330
Sorghum bicolor
Sb03g000330
I
Sb10g000101
Sorghum bicolor
Sb10g000101
N
Si006105m.g
Setaria italica
Si006105m.g
N
Si036303m.g
Setaria italica
Si036303m.g
I
Thhalv10012158m.g
Eutrema salsugineum
Thhalv10012158m.g
I
Thhalv10023502m.g
Eutrema salsugineum
Thhalv10023502m.g
I
TRAES3BF100600040CFD_g
Triticum aestivum
TRAES3BF100600040CFD_g
I
Traes_4AL_22CE41C6F
Triticum aestivum
Traes_4AL_22CE41C6F
N