CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CERSUDRAFT_116480
(
Ceriporiopsis subvermispora
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
CERSUDRAFT_116480
T192207_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMD34953
GATA
433
467
CSNCGATHTPLWRRGLNDELNCNACGLYCKLHKRP
EMD34953
GATA
496
530
CYNCHTTATPLWRKDDEGKTVCNACGLYYKLHGSA
Links
Other
GATA
family TFs
Other
Ceriporiopsis subvermispora
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29797.m000353
Ricinus communis
29797.m000353
N
anac036
Arabidopsis thaliana
AT2G17040
N
anac036
Vitis vinifera
VIT_03s0038g03410
N
anac036
Arabidopsis lyrata
fgenesh2_kg.3__3291__AT2G17040.1
N
Aquca_015_00469
Aquilegia coerulea
Aquca_015_00469
N
Bo3g092020
Brassica oleracea
Bo3g092020
N
Bo7g015050
Brassica oleracea
Bo7g015050
N
Bostr.18351s0165
Boechera stricta
Bostr.18351s0165
N
Bra002018
Brassica rapa
Bra002018
N
Bra013034
Brassica rapa
Bra013034
N
Cagra.0805s0005
Capsella grandiflora
Cagra.0805s0005
N
Carubv10014350m.g
Capsella rubella
Carubv10014350m.g
N
cassava13355.valid.m1
Manihot esculenta
cassava13355.valid.m1
N
cassava30341.valid.m1
Manihot esculenta
cassava30341.valid.m1
N
Ca_11128
Cicer arietinum
Ca_11128
N
chr3.CM0460.350.nd
Lotus japonicus
chr3.CM0460.350.nd
N
Ciclev10029007m.g
Citrus clementina
Ciclev10029007m.g
N
Cla007018
Citrullus lanatus
Cla007018
N
Eucgr.I01494
Eucalyptus grandis
Eucgr.I01494
N
evm.TU.supercontig_320.2
Carica papaya
evm.TU.supercontig_320.2
N
gene17203-v1.0-hybrid
Fragaria vesca
gene17203-v1.0-hybrid
N
GLYMA11G10230
Glycine max
GLYMA11G10230
N
GLYMA12G02540
Glycine max
GLYMA12G02540
N
Gorai.002G001900
Gossypium raimondii
Gorai.002G001900
N
Gorai.005G257800
Gossypium raimondii
Gorai.005G257800
N
Gorai.008G038800
Gossypium raimondii
Gorai.008G038800
N
Lus10003333.g
Linum usitatissimum
Lus10003333.g
N
Lus10022636.g
Linum usitatissimum
Lus10022636.g
N
Lus10023966.g
Linum usitatissimum
Lus10023966.g
N
Lus10025118.g
Linum usitatissimum
Lus10025118.g
N
MDP0000480581
Malus domestica
MDP0000480581
N
MDP0000868556
Malus domestica
MDP0000868556
N
mgf013168m
Mimulus guttatus
mgf013168m
N
MTR_4g075980
Medicago truncatula
MTR_4g075980
N
orange1.1g023427m.g
Citrus sinensis
orange1.1g023427m.g
N
Pm020961
Prunus mume
Pm020961
N
POPTR_0009s14370
Populus trichocarpa
POPTR_0009s14370
N
PRUPE_ppa009455mg
Prunus persica
PRUPE_ppa009455mg
N
SapurV1A.0080s0480
Salix purpurea
SapurV1A.0080s0480
N
SapurV1A.0218s0020
Salix purpurea
SapurV1A.0218s0020
N
TCM_006499
Theobroma cacao
TCM_006499
N
Thhalv10022800m.g
Eutrema salsugineum
Thhalv10022800m.g
N
VIT_04s0008g00150
Vitis vinifera
VIT_04s0008g00150
N