COCVIDRAFT_102224 (Bipolaris victoriae)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 COCVIDRAFT_102224 T192348_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
wc-1
M01236_2.00 		Neurospora crassa
MCGATCGM
KCGATCGK		 PBM
Lambert et al.(2019)
pTH9706 		0.865 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EUN25915 GATA 931 966

Links

Other GATA family TFs
Other Bipolaris victoriae TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00059p00116150 Amborella trichopoda AMTR_s00059p00116150 N
Ciclev10012712m.g Citrus clementina Ciclev10012712m.g N
estExt_fgenesh1_pg.C_4410003 Physcomitrella patens estExt_fgenesh1_pg.C_4410003 N
estExt_Genewise1.C_5600001 Physcomitrella patens estExt_Genewise1.C_5600001 N
estExt_gwp_gw1.C_1330066 Physcomitrella patens estExt_gwp_gw1.C_1330066 N
e_gw1.1.253.1 Physcomitrella patens e_gw1.1.253.1 N
e_gw1.3.607.1 Physcomitrella patens e_gw1.3.607.1 N
e_gw1.3.608.1 Physcomitrella patens e_gw1.3.608.1 N
e_gw1.6.367.1 Physcomitrella patens e_gw1.6.367.1 N
fgenesh1_pg.scaffold_102000043 Physcomitrella patens fgenesh1_pg.scaffold_102000043 N
Lus10004577.g Linum usitatissimum Lus10004577.g N
orange1.1g027730m.g Citrus sinensis orange1.1g027730m.g N
PDK_20s1397531g003 Phoenix dactylifera PDK_20s1397531g003 N
PK19037.1 Cannabis sativa PK19037.1 N
SELMODRAFT_412053 Selaginella moellendorffii SELMODRAFT_412053 N
SELMODRAFT_425306 Selaginella moellendorffii SELMODRAFT_425306 N
SELMODRAFT_427354 Selaginella moellendorffii SELMODRAFT_427354 N
SELMODRAFT_429924 Selaginella moellendorffii SELMODRAFT_429924 N
SELMODRAFT_4832 Selaginella moellendorffii SELMODRAFT_4832 N
VIT_02s0154g00150 Vitis vinifera VIT_02s0154g00150 N