CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_1g016170
(
Medicago truncatula
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
MTR_1g016170
T194184_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES59245
GATA
189
224
CSDCSTSHTPLWRSGPMGPKSLCNACGIRQRKARRA
Links
Other
GATA
family TFs
Other
Medicago truncatula
TFs
129 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29647.m001998
Ricinus communis
29647.m001998
N
0.000
AMTR_s00057p00206030
Amborella trichopoda
AMTR_s00057p00206030
N
0.000
Aquca_017_00223
Aquilegia coerulea
Aquca_017_00223
N
0.000
BGIOSGA005119
Oryza indica
BGIOSGA005119
N
0.000
BRADI2G59937
Brachypodium distachyon
BRADI2G59937
N
0.000
cassava29583.valid.m1
Manihot esculenta
cassava29583.valid.m1
N
0.000
Ciclev10018617m.g
Citrus clementina
Ciclev10018617m.g
N
0.000
GSMUA_Achr1G11230_001
Musa acuminata
GSMUA_Achr1G11230_001
N
0.000
LD
Vitis vinifera
VIT_07s0104g01580
N
0.000
LPERR01G37480
Leersia perrieri
LPERR01G37480
N
0.000
MDP0000209424
Malus domestica
MDP0000209424
N
0.000
OB01G52060
Oryza brachyantha
OB01G52060
N
0.000
OBART01G43050
Oryza barthii
OBART01G43050
N
0.000
OGLUM01G47350
Oryza glumaepatula
OGLUM01G47350
N
0.000
OLONG_017231
Oryza longistaminata
OLONG_017231
N
0.000
ONIVA01G48990
Oryza nivara
ONIVA01G48990
N
0.000
OPUNC01G42000
Oryza punctata
OPUNC01G42000
N
0.000
orange1.1g001425m.g
Citrus sinensis
orange1.1g001425m.g
N
0.000
ORGLA01G0367900
Oryza glaberrima
ORGLA01G0367900
N
0.000
ORUFI01G46480
Oryza rufipogon
ORUFI01G46480
N
0.000
OS01G0934300
Oryza sativa
OS01G0934300
N
0.000
PDK_20s1602441g001
Phoenix dactylifera
PDK_20s1602441g001
N
0.000
PK02496.1
Cannabis sativa
PK02496.1
N
0.000
POPTR_0002s20990
Populus trichocarpa
POPTR_0002s20990
N
0.000
POPTR_0014s12730
Populus trichocarpa
POPTR_0014s12730
N
0.000
SapurV1A.0155s0080
Salix purpurea
SapurV1A.0155s0080
N
0.000
Solyc09g074690.2
Solanum lycopersicum
Solyc09g074690.2
N
0.000
TCM_004566
Theobroma cacao
TCM_004566
N
0.000
Traes_3B_3142C10C9
Triticum aestivum
Traes_3B_3142C10C9
N
0.000
Traes_3DL_D4FBDA9DC
Triticum aestivum
Traes_3DL_D4FBDA9DC
N
0.000
TRIUR3_34541
Triticum urartu
TRIUR3_34541
N
0.000