TCM_004566 (Theobroma cacao)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 TCM_004566 T223888_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOX94988 Homeodomain 69 125

Links

Other Homeodomain family TFs
Other Theobroma cacao TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0014s12730 Populus trichocarpa POPTR_0014s12730 N 0.813
Ciclev10018617m.g Citrus clementina Ciclev10018617m.g N 0.796
orange1.1g001425m.g Citrus sinensis orange1.1g001425m.g N 0.796
Solyc09g074690.2 Solanum lycopersicum Solyc09g074690.2 N 0.780
BRADI2G59937 Brachypodium distachyon BRADI2G59937 N 0.770
BGIOSGA005119 Oryza indica BGIOSGA005119 N 0.764
LPERR01G37480 Leersia perrieri LPERR01G37480 N 0.764
OBART01G43050 Oryza barthii OBART01G43050 N 0.764
OGLUM01G47350 Oryza glumaepatula OGLUM01G47350 N 0.764
OLONG_017231 Oryza longistaminata OLONG_017231 N 0.764
ONIVA01G48990 Oryza nivara ONIVA01G48990 N 0.764
OPUNC01G42000 Oryza punctata OPUNC01G42000 N 0.764
ORGLA01G0367900 Oryza glaberrima ORGLA01G0367900 N 0.764
ORUFI01G46480 Oryza rufipogon ORUFI01G46480 N 0.764
OS01G0934300 Oryza sativa OS01G0934300 N 0.764
Traes_3B_3142C10C9 Triticum aestivum Traes_3B_3142C10C9 N 0.748
Traes_3DL_D4FBDA9DC Triticum aestivum Traes_3DL_D4FBDA9DC N 0.748
TRIUR3_34541 Triticum urartu TRIUR3_34541 N 0.748
LD Vitis vinifera VIT_07s0104g01580 N 0.739
POPTR_0002s20990 Populus trichocarpa POPTR_0002s20990 N 0.738
SapurV1A.0155s0080 Salix purpurea SapurV1A.0155s0080 N 0.738
OB01G52060 Oryza brachyantha OB01G52060 N 0.734
AMTR_s00057p00206030 Amborella trichopoda AMTR_s00057p00206030 N 0.732
Aquca_017_00223 Aquilegia coerulea Aquca_017_00223 N 0.719
GSMUA_Achr1G11230_001 Musa acuminata GSMUA_Achr1G11230_001 N 0.714
PK02496.1 Cannabis sativa PK02496.1 N 0.710
cassava29582.valid.m1 Manihot esculenta cassava29582.valid.m1 N 0.709
cassava29583.valid.m1 Manihot esculenta cassava29583.valid.m1 N 0.709
PDK_20s1602441g001 Phoenix dactylifera PDK_20s1602441g001 N 0.680
Gorai.004G088100 Gossypium raimondii Gorai.004G088100 N 0.601