AMTR_s00057p00206030 (Amborella trichopoda)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 AMTR_s00057p00206030 T204395_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERN16982 Homeodomain 70 126

Links

Other Homeodomain family TFs
Other Amborella trichopoda TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr1G11230_001 Musa acuminata GSMUA_Achr1G11230_001 N 0.848
LD Vitis vinifera VIT_07s0104g01580 N 0.833
Aquca_017_00223 Aquilegia coerulea Aquca_017_00223 N 0.833
PK02496.1 Cannabis sativa PK02496.1 N 0.818
PDK_20s1602441g001 Phoenix dactylifera PDK_20s1602441g001 N 0.815
cassava29582.valid.m1 Manihot esculenta cassava29582.valid.m1 N 0.767
cassava29583.valid.m1 Manihot esculenta cassava29583.valid.m1 N 0.767
BRADI2G59937 Brachypodium distachyon BRADI2G59937 N 0.746
BGIOSGA005119 Oryza indica BGIOSGA005119 N 0.735
LPERR01G37480 Leersia perrieri LPERR01G37480 N 0.735
OBART01G43050 Oryza barthii OBART01G43050 N 0.735
OGLUM01G47350 Oryza glumaepatula OGLUM01G47350 N 0.735
OLONG_017231 Oryza longistaminata OLONG_017231 N 0.735
ONIVA01G48990 Oryza nivara ONIVA01G48990 N 0.735
OPUNC01G42000 Oryza punctata OPUNC01G42000 N 0.735
ORGLA01G0367900 Oryza glaberrima ORGLA01G0367900 N 0.735
ORUFI01G46480 Oryza rufipogon ORUFI01G46480 N 0.735
OS01G0934300 Oryza sativa OS01G0934300 N 0.735
TCM_004566 Theobroma cacao TCM_004566 N 0.732
Traes_3B_3142C10C9 Triticum aestivum Traes_3B_3142C10C9 N 0.731
Traes_3DL_D4FBDA9DC Triticum aestivum Traes_3DL_D4FBDA9DC N 0.731
TRIUR3_34541 Triticum urartu TRIUR3_34541 N 0.731
POPTR_0002s20990 Populus trichocarpa POPTR_0002s20990 N 0.720
SapurV1A.0155s0080 Salix purpurea SapurV1A.0155s0080 N 0.720
POPTR_0014s12730 Populus trichocarpa POPTR_0014s12730 N 0.719
OB01G52060 Oryza brachyantha OB01G52060 N 0.717
Solyc09g074690.2 Solanum lycopersicum Solyc09g074690.2 N 0.702
Ciclev10018617m.g Citrus clementina Ciclev10018617m.g N 0.702
orange1.1g001425m.g Citrus sinensis orange1.1g001425m.g N 0.702
Pavir.Ea03823 Panicum virgatum Pavir.Ea03823 N 0.628
Pavir.Eb03820 Panicum virgatum Pavir.Eb03820 N 0.628
Si000079m.g Setaria italica Si000079m.g N 0.615
Cucsa.025330 Cucumis sativus Cucsa.025330 N 0.613
Sb03g045030 Sorghum bicolor Sb03g045030 N 0.610
GRMZM2G106613 Zea mays GRMZM2G106613 N 0.609