CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.025330
(
Cucumis sativus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Cucsa.025330
T227160_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.025330.1
Homeodomain
69
125
KRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVREFFNSQRSRVRK
Links
Other
Homeodomain
family TFs
Other
Cucumis sativus
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla014917
Citrullus lanatus
Cla014917
N
0.849
Eucgr.H01192
Eucalyptus grandis
Eucgr.H01192
N
0.848
gene24915-v1.0-hybrid
Fragaria vesca
gene24915-v1.0-hybrid
N
0.799
GLYMA19G39620
Glycine max
GLYMA19G39620
N
0.798
GLYMA03G36970
Glycine max
GLYMA03G36970
N
0.798
MDP0000209424
Malus domestica
MDP0000209424
N
0.792
29647.m001998
Ricinus communis
29647.m001998
N
0.779
Pm019976
Prunus mume
Pm019976
N
0.778
PRUPE_ppa000815mg
Prunus persica
PRUPE_ppa000815mg
N
0.778
MDP0000161239
Malus domestica
MDP0000161239
N
0.771
Gorai.004G088100
Gossypium raimondii
Gorai.004G088100
N
0.760
LD
Vitis vinifera
VIT_07s0104g01580
N
0.620
Ca_00942
Cicer arietinum
Ca_00942
N
0.614
AMTR_s00057p00206030
Amborella trichopoda
AMTR_s00057p00206030
N
0.613
Pavir.Eb03820
Panicum virgatum
Pavir.Eb03820
N
0.608
Pavir.Ea03823
Panicum virgatum
Pavir.Ea03823
N
0.608