CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pm019976
(
Prunus mume
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Pm019976
T226670_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm019976
Homeodomain
65
121
KRPRDLLNPKAIKYMQSVFSIKDAISKKESRELSALFGVTGTQVRDFFNSQRSRVRK
Links
Other
Homeodomain
family TFs
Other
Prunus mume
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa000815mg
Prunus persica
PRUPE_ppa000815mg
N
0.867
MDP0000209424
Malus domestica
MDP0000209424
N
0.840
MDP0000161239
Malus domestica
MDP0000161239
N
0.818
29647.m001998
Ricinus communis
29647.m001998
N
0.817
gene24915-v1.0-hybrid
Fragaria vesca
gene24915-v1.0-hybrid
N
0.811
Eucgr.H01192
Eucalyptus grandis
Eucgr.H01192
N
0.796
Cucsa.025330
Cucumis sativus
Cucsa.025330
N
0.778
Cla014917
Citrullus lanatus
Cla014917
N
0.778
GLYMA03G36970
Glycine max
GLYMA03G36970
N
0.746
GLYMA19G39620
Glycine max
GLYMA19G39620
N
0.746
Gorai.004G088100
Gossypium raimondii
Gorai.004G088100
N
0.709