Pavir.Eb03820 (Panicum virgatum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Pavir.Eb03820 T229261_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Eb03820.1.p Homeodomain 74 130
Pavir.Eb03820.2.p Homeodomain 74 130
Pavir.Eb03820.3.p Homeodomain 74 130
Pavir.Eb03820.4.p Homeodomain 74 130

Links

Other Homeodomain family TFs
Other Panicum virgatum TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ea03823 Panicum virgatum Pavir.Ea03823 N 0.866
Si000079m.g Setaria italica Si000079m.g N 0.853
Sb03g045030 Sorghum bicolor Sb03g045030 N 0.848
GRMZM2G106613 Zea mays GRMZM2G106613 N 0.847
Ca_00942 Cicer arietinum Ca_00942 N 0.822
mgf010586m Mimulus guttatus mgf010586m N 0.785
evm.TU.supercontig_9.189 Carica papaya evm.TU.supercontig_9.189 N 0.743
Lus10009816.g Linum usitatissimum Lus10009816.g N 0.740
Lus10040921.g Linum usitatissimum Lus10040921.g N 0.740
AMTR_s00057p00206030 Amborella trichopoda AMTR_s00057p00206030 N 0.628
GSMUA_Achr1G11230_001 Musa acuminata GSMUA_Achr1G11230_001 N 0.610
Cucsa.025330 Cucumis sativus Cucsa.025330 N 0.608