CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10009816.g
(
Linum usitatissimum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Lus10009816.g
T228850_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10009816
Homeodomain
69
125
KRPRDLLNPKAIKYMQAVFSIKDAISKKESRQISAQFSITVTQVREFFTSQRSRVRR
Links
Other
Homeodomain
family TFs
Other
Linum usitatissimum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10040921.g
Linum usitatissimum
Lus10040921.g
N
0.867
Ca_00942
Cicer arietinum
Ca_00942
N
0.746
Pavir.Ea03823
Panicum virgatum
Pavir.Ea03823
N
0.740
Pavir.Eb03820
Panicum virgatum
Pavir.Eb03820
N
0.740
GRMZM2G106613
Zea mays
GRMZM2G106613
N
0.727
Si000079m.g
Setaria italica
Si000079m.g
N
0.727
Sb03g045030
Sorghum bicolor
Sb03g045030
N
0.722
mgf010586m
Mimulus guttatus
mgf010586m
N
0.711
evm.TU.supercontig_9.189
Carica papaya
evm.TU.supercontig_9.189
N
0.668