cassava29582.valid.m1 (Manihot esculenta)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 cassava29582.valid.m1 T227092_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava29582.valid.m1 Homeodomain 69 125

Links

Other Homeodomain family TFs
Other Manihot esculenta TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava29583.valid.m1 Manihot esculenta cassava29583.valid.m1 N 0.867
LD Vitis vinifera VIT_07s0104g01580 N 0.774
AMTR_s00057p00206030 Amborella trichopoda AMTR_s00057p00206030 N 0.767
Solyc09g074690.2 Solanum lycopersicum Solyc09g074690.2 N 0.753
PK02496.1 Cannabis sativa PK02496.1 N 0.750
GSMUA_Achr1G11230_001 Musa acuminata GSMUA_Achr1G11230_001 N 0.749
Aquca_017_00223 Aquilegia coerulea Aquca_017_00223 N 0.734
POPTR_0002s20990 Populus trichocarpa POPTR_0002s20990 N 0.721
SapurV1A.0155s0080 Salix purpurea SapurV1A.0155s0080 N 0.721
POPTR_0014s12730 Populus trichocarpa POPTR_0014s12730 N 0.720
PDK_20s1602441g001 Phoenix dactylifera PDK_20s1602441g001 N 0.720
Ciclev10018617m.g Citrus clementina Ciclev10018617m.g N 0.712
orange1.1g001425m.g Citrus sinensis orange1.1g001425m.g N 0.712
TCM_004566 Theobroma cacao TCM_004566 N 0.709
BGIOSGA005119 Oryza indica BGIOSGA005119 N 0.664
LPERR01G37480 Leersia perrieri LPERR01G37480 N 0.664
OBART01G43050 Oryza barthii OBART01G43050 N 0.664
OGLUM01G47350 Oryza glumaepatula OGLUM01G47350 N 0.664
OLONG_017231 Oryza longistaminata OLONG_017231 N 0.664
ONIVA01G48990 Oryza nivara ONIVA01G48990 N 0.664
OPUNC01G42000 Oryza punctata OPUNC01G42000 N 0.664
ORGLA01G0367900 Oryza glaberrima ORGLA01G0367900 N 0.664
ORUFI01G46480 Oryza rufipogon ORUFI01G46480 N 0.664
OS01G0934300 Oryza sativa OS01G0934300 N 0.664
BRADI2G59937 Brachypodium distachyon BRADI2G59937 N 0.662
Traes_3B_3142C10C9 Triticum aestivum Traes_3B_3142C10C9 N 0.636
Traes_3DL_D4FBDA9DC Triticum aestivum Traes_3DL_D4FBDA9DC N 0.636
TRIUR3_34541 Triticum urartu TRIUR3_34541 N 0.636
OB01G52060 Oryza brachyantha OB01G52060 N 0.634
29647.m001998 Ricinus communis 29647.m001998 N 0.621
MDP0000209424 Malus domestica MDP0000209424 N 0.606