CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400020491
(
Solanum tuberosum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
PGSC0003DMG400020491
T194712_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400052799
GATA
7
42
CYHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTL
PGSC0003DMT400052800
GATA
7
42
CYHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTL
Links
Other
GATA
family TFs
Other
Solanum tuberosum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BN946_scf184576.g4
Trametes cinnabarina
BN946_scf184576.g4
I
0.000
CC1G_00679
Coprinopsis cinerea
CC1G_00679
I
0.000
CERSUDRAFT_79927
Ceriporiopsis subvermispora
CERSUDRAFT_79927
I
0.000
fgenesh1_pg.C_scaffold_18000061
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_18000061
I
0.000
fgenesh2_pg.C_scaffold_1000086
Heterobasidion annosum
fgenesh2_pg.C_scaffold_1000086
I
0.000
FOMPIDRAFT_1133812
Fomitopsis pinicola
FOMPIDRAFT_1133812
I
0.000
GALMADRAFT_225495
Galerina marginata
GALMADRAFT_225495
I
0.000
GLOTRDRAFT_30797
Gloeophyllum trabeum
GLOTRDRAFT_30797
I
0.000
JAAARDRAFT_75549
Jaapia argillacea
JAAARDRAFT_75549
N
0.000
K443DRAFT_678969
Laccaria amethystina
K443DRAFT_678969
I
0.000
LACBIDRAFT_291829
Laccaria bicolor
LACBIDRAFT_291829
I
0.000
M378DRAFT_6115
Amanita muscaria
M378DRAFT_6115
I
0.000
M404DRAFT_998457
Pisolithus tinctorius
M404DRAFT_998457
N
0.000
Moror_4577
Moniliophthora roreri
Moror_4577
I
0.000
PAXINDRAFT_86770
Paxillus involutus
PAXINDRAFT_86770
I
0.000
PAXRUDRAFT_128990
Paxillus rubicundulus
PAXRUDRAFT_128990
I
0.000
PHACADRAFT_169221
Phanerochaete carnosa
PHACADRAFT_169221
I
0.000
PHLGIDRAFT_79048
Phlebiopsis gigantea
PHLGIDRAFT_79048
I
0.000
PILCRDRAFT_820718
Piloderma croceum
PILCRDRAFT_820718
I
0.000
PISMIDRAFT_672010
Pisolithus microcarpus
PISMIDRAFT_672010
N
0.000
PISMIDRAFT_690687
Pisolithus microcarpus
PISMIDRAFT_690687
N
0.000
POSPLDRAFT_106184
Postia placenta
POSPLDRAFT_106184
I
0.000
SCHCODRAFT_114530
Schizophyllum commune
SCHCODRAFT_114530
N
0.000
SCHCODRAFT_258883
Schizophyllum commune
SCHCODRAFT_258883
D
0.000
SERLA73DRAFT_115823
Serpula lacrymans
SERLA73DRAFT_115823
I
0.000
SERLA73DRAFT_63698
Serpula lacrymans
SERLA73DRAFT_63698
I
0.000