CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb03g013700
(
Sorghum bicolor
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
Sb03g013700
T195094_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb03g013700.1
GATA
22
57
CVECRATTTPMWRSGPTGPRSLCNACGIRYRKKRRQ
Sb03g013700.2
GATA
22
57
CVECRATTTPMWRSGPTGPRSLCNACGIRYRKKRRQ
Links
Other
GATA
family TFs
Other
Sorghum bicolor
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_010_00624
Aquilegia coerulea
Aquca_010_00624
N
AT5G52010
Arabidopsis thaliana
AT5G52010
N
Bostr.15774s0347
Boechera stricta
Bostr.15774s0347
N
Bra029148
Brassica rapa
Bra029148
N
cassava8973.m1
Manihot esculenta
cassava8973.m1
N
cassava9166.m1
Manihot esculenta
cassava9166.m1
N
Ca_09158
Cicer arietinum
Ca_09158
N
chr5.CM0852.210.nc
Lotus japonicus
chr5.CM0852.210.nc
N
Cla020960
Citrullus lanatus
Cla020960
N
Cucsa.352460
Cucumis sativus
Cucsa.352460
N
evm.TU.supercontig_21.168
Carica papaya
evm.TU.supercontig_21.168
N
fgenesh1_pg.C_scaffold_8001227
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_8001227
N
Gorai.003G099900
Gossypium raimondii
Gorai.003G099900
N
Gorai.010G022000
Gossypium raimondii
Gorai.010G022000
N
GSMUA_Achr8G18570_001
Musa acuminata
GSMUA_Achr8G18570_001
N
Lus10018728.g
Linum usitatissimum
Lus10018728.g
N
PK24307.1
Cannabis sativa
PK24307.1
N
POPTR_0014s02520
Populus trichocarpa
POPTR_0014s02520
N
SapurV1A.0423s0190
Salix purpurea
SapurV1A.0423s0190
N
SapurV1A.2355s0020
Salix purpurea
SapurV1A.2355s0020
N