TRIVIDRAFT_214458 (Trichoderma virens)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 TRIVIDRAFT_214458 T195544_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sub-1
M01235_2.00 		Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN		 PBM
Lambert et al.(2019)
pTH8614 		0.867 1.000
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EHK16901 GATA 416 451

Links

Other GATA family TFs
Other Trichoderma virens TFs

207 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA029574 Oryza indica BGIOSGA029574 I 0.000
Bo3g180930 Brassica oleracea Bo3g180930 N 0.000
Bo3g180960 Brassica oleracea Bo3g180960 I 0.000
Bo3g184540 Brassica oleracea Bo3g184540 N 0.000
Bo3g185390 Brassica oleracea Bo3g185390 I 0.000
Bo3g185420 Brassica oleracea Bo3g185420 I 0.000
Bo6g034690 Brassica oleracea Bo6g034690 I 0.000
Bo6g051390 Brassica oleracea Bo6g051390 I 0.000
Bostr.6758s0015 Boechera stricta Bostr.6758s0015 I 0.000
Bra030847 Brassica rapa Bra030847 I 0.000
Bra030848 Brassica rapa Bra030848 N 0.000
Bra037106 Brassica rapa Bra037106 I 0.000
Bra038006 Brassica rapa Bra038006 I 0.000
Ca_13524 Cicer arietinum Ca_13524 I 0.000
evm.TU.supercontig_12.196 Carica papaya evm.TU.supercontig_12.196 I 0.000
GLYMA06G37100 Glycine max GLYMA06G37100 I 0.000
GLYMA17G24700 Glycine max GLYMA17G24700 I 0.000
GRMZM2G052671 Zea mays GRMZM2G052671 I 0.000
GRMZM2G151407 Zea mays GRMZM2G151407 I 0.000
GRMZM2G449681 Zea mays GRMZM2G449681 I 0.000
Lus10026409.g Linum usitatissimum Lus10026409.g I 0.000
MLOC_58019 Hordeum vulgare MLOC_58019 I 0.000
MLOC_67851 Hordeum vulgare MLOC_67851 I 0.000
OB04G23060 Oryza brachyantha OB04G23060 I 0.000
OBART09G14210 Oryza barthii OBART09G14210 I 0.000
OGLUM09G14860 Oryza glumaepatula OGLUM09G14860 I 0.000
OLONG_005396 Oryza longistaminata OLONG_005396 I 0.000
OMERI09G11000 Oryza meridionalis OMERI09G11000 I 0.000
ONIVA04G13890 Oryza nivara ONIVA04G13890 I 0.000
ONIVA09G14780 Oryza nivara ONIVA09G14780 I 0.000
OPUNC09G12700 Oryza punctata OPUNC09G12700 I 0.000
orange1.1g011483m.g Citrus sinensis orange1.1g011483m.g I 0.000
ORGLA09G0109100 Oryza glaberrima ORGLA09G0109100 I 0.000
ORUFI09G15250 Oryza rufipogon ORUFI09G15250 I 0.000
OS09G0481700 Oryza sativa OS09G0481700 I 0.000
Pavir.Bb02418 Panicum virgatum Pavir.Bb02418 I 0.000
Pavir.J13787 Panicum virgatum Pavir.J13787 I 0.000
Pavir.J40119 Panicum virgatum Pavir.J40119 I 0.000
Sb02g027950 Sorghum bicolor Sb02g027950 I 0.000
Si029342m.g Setaria italica Si029342m.g I 0.000
Thhalv10012199m.g Eutrema salsugineum Thhalv10012199m.g I 0.000