VIT_04s0008g03270 (Vitis vinifera)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 VIT_04s0008g03270 T195667_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.867 1.000
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.867 1.000
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.867 1.000
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.862 0.972
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.847 0.889
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.847 0.889
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.843 0.833
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.843 0.833
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.838 0.806
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.832 0.833
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.832 0.833
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.832 0.833
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.832 0.778
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.832 0.778
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.823 0.806
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.823 0.806
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.823 0.806
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.819 0.750
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_04s0008g03270.t01 GATA 233 268

Links

Other GATA family TFs
Other Vitis vinifera TFs

614 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R009568 Calypte anna Aan_R009568 I 0.000
ACOC_0001203801 Angiostrongylus costaricensis ACOC_0001203801 I 0.000
Alligator_sinensis_CCG005388.1 Alligator sinensis Alligator_sinensis_CCG005388.1 I 0.000
ALUE_0000441701 Ascaris lumbricoides ALUE_0000441701 I 0.000
ANCCAN_00594 Ancylostoma caninum ANCCAN_00594 I 0.000
ANCCEY_05940 Ancylostoma ceylanicum ANCCEY_05940 I 0.000
ANCDUO_10264 Ancylostoma duodenale ANCDUO_10264 I 0.000
ASIM_0001129301 Anisakis simplex ASIM_0001129301 I 0.000
ASU_13052 Ascaris suum ASU_13052 I 0.000
augustus_masked-nMf.1.1.scaf01525-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01525-processed-gene-0.0 I 0.000
Bm6499 Brugia malayi Bm6499 I 0.000
BTMF_0000199301 Brugia timori BTMF_0000199301 I 0.000
CBG20386 Caenorhabditis briggsae CBG20386 I 0.000
Cflo_10237--XP_624316.2_APIME Camponotus floridanus Cflo_10237--XP_624316.2_APIME I 0.000
CGI_10013026 Crassostrea gigas CGI_10013026 I 0.000
Cmyd_10006878 Chelonia mydas Cmyd_10006878 I 0.000
CRE28577 Caenorhabditis remanei CRE28577 I 0.000
DICVIV_09031 Dictyocaulus viviparus DICVIV_09031 I 0.000
DME_0000423301 Dracunculus medinensis DME_0000423301 I 0.000
EEL_0000517301 Elaeophora elaphi EEL_0000517301 I 0.000
ENSAMEG00000012479 Ailuropoda melanoleuca ENSAMEG00000012479 I 0.000
ENSAPLG00000007170 Anas platyrhynchos ENSAPLG00000007170 I 0.000
ENSBTAP00000003929-D1 Bos grunniens ENSBTAP00000003929-D1 I 0.000
ENSCSAG00000005498 Chlorocebus sabaeus ENSCSAG00000005498 I 0.000
ENSECAG00000020197 Equus caballus ENSECAG00000020197 I 0.000
ENSGALG00000028401 Gallus gallus ENSGALG00000028401 I 0.000
ENSMEUG00000004493 Macropus eugenii ENSMEUG00000004493 I 0.000
ENSMMUP00000026353 Macaca fascicularis ENSMMUP00000026353 I 0.000
ENSNLEG00000017699 Nomascus leucogenys ENSNLEG00000017699 I 0.000
ENSOARG00000016514 Ovis aries ENSOARG00000016514 I 0.000
ENSONIG00000005121 Oreochromis niloticus ENSONIG00000005121 I 0.000
ENSPANG00000018241 Papio anubis ENSPANG00000018241 I 0.000
ENSPFOG00000007682 Poecilia formosa ENSPFOG00000007682 I 0.000
ENSPPYG00000004579 Pongo abelii ENSPPYG00000004579 I 0.000
ENSPSIG00000007013 Pelodiscus sinensis ENSPSIG00000007013 I 0.000
ENSSTOG00000005928 Ictidomys tridecemlineatus ENSSTOG00000005928 I 0.000
ENSTSYG00000001068 Tarsius syrichta ENSTSYG00000001068 I 0.000
ENSXMAG00000017829 Xiphophorus maculatus ENSXMAG00000017829 I 0.000
EVEC_0000041101 Enterobius vermicularis EVEC_0000041101 I 0.000
Gfo_R005030 Geospiza fortis Gfo_R005030 I 0.000
GPUH_0001030801 Gongylonema pulchrum GPUH_0001030801 I 0.000
HCOI00688600 Haemonchus contortus HCOI00688600 I 0.000
HPBE_0001438901 Heligmosomoides bakeri HPBE_0001438901 I 0.000
HPLM_0000529101 Haemonchus placei HPLM_0000529101 I 0.000
LDEC008345 Leptinotarsa decemlineata LDEC008345 I 0.000
LOAG_01580 Loa loa LOAG_01580 I 0.000
MhA1_Contig599.frz3.gene7 Meloidogyne hapla MhA1_Contig599.frz3.gene7 I 0.000
Myotis_brandtii_SP1_10022992 Myotis brandtii Myotis_brandtii_SP1_10022992 I 0.000
nAv.1.0.1.g06936 Acanthocheilonema viteae nAv.1.0.1.g06936 I 0.000
NBR_0001206901 Nippostrongylus brasiliensis NBR_0001206901 I 0.000
nDi.2.2.2.g02202 Dirofilaria immitis nDi.2.2.2.g02202 I 0.000
NECAME_13378 Necator americanus NECAME_13378 I 0.000
nLs.2.1.2.g07946 Litomosoides sigmodontis nLs.2.1.2.g07946 I 0.000
nOo.2.0.1.g09582 Onchocerca ochengi nOo.2.0.1.g09582 I 0.000
Ogr16979 Ophisaurus gracilis Ogr16979 I 0.000
Pvit_07435 Pogona vitticeps Pvit_07435 I 0.000
RSKR_0000732300 Rhabditophanes kr3021 RSKR_0000732300 I 0.000
SMUV_0000007001 Syphacia muris SMUV_0000007001 I 0.000
SP1 Oryctolagus cuniculus ENSOCUG00000004147 I 0.000
SP1 Anolis carolinensis ENSACAG00000000610 I 0.000
SP1 Bos taurus ENSBTAG00000003021 I 0.000
SP1 Canis familiaris ENSCAFG00000006950 I 0.000
SP1 Choloepus hoffmanni ENSCHOG00000001703 I 0.000
SP1 Callithrix jacchus ENSCJAG00000018553 I 0.000
SP1 Cavia porcellus ENSCPOG00000023095 I 0.000
SP1 Dasypus novemcinctus ENSDNOG00000017346 I 0.000
SP1 Erinaceus europaeus ENSEEUG00000013568 I 0.000
SP1 Felis catus ENSFCAG00000030741 I 0.000
SP1 Homo sapiens ENSG00000185591 D 0.000
SP1 Gorilla gorilla ENSGGOG00000012593 I 0.000
SP1 Loxodonta africana ENSLAFG00000018043 I 0.000
SP1 Myotis lucifugus ENSMLUG00000017303 I 0.000
SP1 Macaca mulatta ENSMMUG00000020036 I 0.000
Sp1 Mus musculus ENSMUSG00000001280 D 0.000
SP1 Ochotona princeps ENSOPRG00000000691 I 0.000
sp1 Oryzias latipes ENSORLG00000005195 I 0.000
SP1 Procavia capensis ENSPCAG00000004934 I 0.000
SP1 Pan troglodytes ENSPTRG00000005014 I 0.000
SP1 Pteropus vampyrus ENSPVAG00000012280 I 0.000
Sp1 Rattus norvegicus ENSRNOG00000014084 I 0.000
SP1 Sorex araneus ENSSARG00000013480 I 0.000
SP1 Sus scrofa ENSSSCG00000000272 I 0.000
SP1 Tupaia belangeri ENSTBEG00000010202 I 0.000
SP1 Taeniopygia guttata ENSTGUG00000015642 I 0.000
sp1 Tetraodon nigroviridis ENSTNIG00000007066 I 0.000
sp1 Takifugu rubripes ENSTRUG00000014305 I 0.000
SP1 Tursiops truncatus ENSTTRG00000009591 I 0.000
sptf-3 Caenorhabditis elegans WBGene00012735 D 0.000
WBGene00237583 Onchocerca volvulus WBGene00237583 I 0.000
WBGene00237584 Onchocerca volvulus WBGene00237584 I 0.000