fgenesh1_pm.scaffold_69000012 (Physcomitrella patens)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 fgenesh1_pm.scaffold_69000012 T196214_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA28
M01996_2.00 		Arabidopsis thaliana
NNGATNN
NNATCNN		 PBM
Weirauch et al.(2014)
pTH7505 		0.867 0.917
GATA28
M06883_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATG
CATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
ZML2_col_a 		0.867 0.917
OS06G0698900
M02015_2.00 		Oryza sativa
NNNNAHBNN
NNVDTNNNN		 PBM
Weirauch et al.(2014)
pTH8641 		0.851 0.861
GATA24
M01941_2.00 		Arabidopsis thaliana
HGATBNN
NNVATCD		 PBM
Weirauch et al.(2014)
pTH7661 		0.847 0.861
ZIM
M06892_2.00 		Arabidopsis thaliana
AWYSRACGGYYVWGA
TCWBRRCCGTYSRWT		 Dap-seq
OMalley et al.(2016)
ZIM_col_a 		0.810 0.806
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.scaffold_69000012 GATA 279 316

Links

Other GATA family TFs
Other Physcomitrella patens TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL008660 Aedes aegypti AAEL008660 I
AALB002674 Anopheles albimanus AALB002674 I
AARA001906 Anopheles arabiensis AARA001906 I
AATE014019 Anopheles atroparvus AATE014019 I
ACHR004799 Anopheles christyi ACHR004799 I
ACOM034154 Anopheles coluzzii ACOM034154 I
ACUA004590 Anopheles culicifacies ACUA004590 I
ACYPI37626 Acyrthosiphon pisum ACYPI37626 I
ADAC008497 Anopheles darlingi ADAC008497 I
ADIR010545 Anopheles dirus ADIR010545 I
AEPI006242 Anopheles epiroticus AEPI006242 I
AFAF002909 Anopheles farauti AFAF002909 I
AFUN008310 Anopheles funestus AFUN008310 I
AGAP001448 Anopheles gambiae AGAP001448 I
AMAM018725 Anopheles maculatus AMAM018725 I
AMEC009154 Anopheles melas AMEC009154 I
AMEM011331 Anopheles merus AMEM011331 I
AMIN003266 Anopheles minimus AMIN003266 I
AQUA006634 Anopheles quadriannulatus AQUA006634 I
ASIS019386 Anopheles sinensis ASIS019386 I
BGLB003958 Biomphalaria glabrata BGLB003958 I
CapteG59283 Capitella teleta CapteG59283 I
CGI_10017809 Crassostrea gigas CGI_10017809 I
CLEC012470 Cimex lectularius CLEC012470 I
CPIJ006258 Culex quinquefasciatus CPIJ006258 I
CpipJ_CPIJ006258 Culex pipiens CpipJ_CPIJ006258 I
csin111295 Clonorchis sinensis csin111295 I
D915_00775 Fasciola hepatica D915_00775 I
D917_00545 Trichinella nativa D917_00545 I
D918_01499 Trichuris suis D918_01499 I
DAPPUDRAFT_18360 Daphnia pulex DAPPUDRAFT_18360 I
DILT_0001058801 Diphyllobothrium latum DILT_0001058801 I
ECANG7_07852 Echinococcus canadensis ECANG7_07852 I
ECPE_0000418201 Echinostoma caproni ECPE_0000418201 I
EFV58245 Trichinella spiralis EFV58245 I
EmuJ_000998300 Echinococcus multilocularis EmuJ_000998300 I
ENSAMEG00000006374 Ailuropoda melanoleuca ENSAMEG00000006374 I
ENSAMXG00000008222 Astyanax mexicanus ENSAMXG00000008222 I
ENSCSAG00000012422 Chlorocebus sabaeus ENSCSAG00000012422 I
ENSFALG00000007280 Ficedula albicollis ENSFALG00000007280 I
ENSGMOG00000016849 Gadus morhua ENSGMOG00000016849 I
ENSLACG00000013727 Latimeria chalumnae ENSLACG00000013727 I
ENSLOCG00000003186 Lepisosteus oculatus ENSLOCG00000003186 I
ENSMEUG00000004292 Macropus eugenii ENSMEUG00000004292 I
ENSNLEG00000012897 Nomascus leucogenys ENSNLEG00000012897 I
ENSONIG00000016978 Oreochromis niloticus ENSONIG00000016978 I
ENSPANG00000023093 Papio anubis ENSPANG00000023093 I
ENSPFOG00000002486 Poecilia formosa ENSPFOG00000002486 I
ENSPMAG00000003727 Petromyzon marinus ENSPMAG00000003727 I
ENSPPYG00000002150 Pongo abelii ENSPPYG00000002150 I
ENSPSIG00000007810 Pelodiscus sinensis ENSPSIG00000007810 I
ENSPVAG00000013738 Pteropus vampyrus ENSPVAG00000013738 I
ENSSTOG00000022679 Ictidomys tridecemlineatus ENSSTOG00000022679 I
ENSTGUG00000001180 Taeniopygia guttata ENSTGUG00000001180 I
ENSXMAG00000015151 Xiphophorus maculatus ENSXMAG00000015151 I
estExt_fgenesh2_pg.C_640081 Branchiostoma floridae estExt_fgenesh2_pg.C_640081 I
estExt_GenewiseH_1.C_3210010 Branchiostoma floridae estExt_GenewiseH_1.C_3210010 I
estExt_GenewiseH_1.C_3210011 Branchiostoma floridae estExt_GenewiseH_1.C_3210011 I
Fer1 Drosophila melanogaster FBgn0037475 D
GD19915 Drosophila simulans FBgn0191398 I
GE24907 Drosophila yakuba FBgn0242002 I
GF17655 Drosophila ananassae FBgn0094673 I
GG13863 Drosophila erecta FBgn0106126 I
GH19006 Drosophila grimshawi FBgn0126473 I
GI23061 Drosophila mojavensis FBgn0145788 I
GJ24574 Drosophila virilis FBgn0211653 I
GK14521 Drosophila willistoni FBgn0216527 I
GL12422 Drosophila persimilis FBgn0150028 I
GM10936 Drosophila sechellia FBgn0165881 I
HelroG86431 Helobdella robusta HelroG86431 I
HmN_000218700 Hymenolepis microstoma HmN_000218700 I
ISCW003737 Ixodes scapularis ISCW003737 I
KGM_14030 Danaus plexippus KGM_14030 I
L798_11980 Zootermopsis nevadensis L798_11980 I
LCUP002382 Lucilia cuprina LCUP002382 I
LDEC016362 Leptinotarsa decemlineata LDEC016362 I
LLOJ003726 Lutzomyia longipalpis LLOJ003726 I
LLOJ004204 Lutzomyia longipalpis LLOJ004204 I
LLOJ005004 Lutzomyia longipalpis LLOJ005004 I
LotgiG66849 Lottia gigantea LotgiG66849 I
MCOS_0000879301 Mesocestoides corti MCOS_0000879301 I
MDOA013156 Musca domestica MDOA013156 I
MESCA008421 Megaselia scalaris MESCA008421 I
NEMVEDRAFT_v1g97005 Nematostella vectensis NEMVEDRAFT_v1g97005 I
Ocbimv22012139m.g Octopus bimaculoides Ocbimv22012139m.g I
PHUM498120 Pediculus humanus PHUM498120 I
PPAI005132 Phlebotomus papatasi PPAI005132 I
PTF1A Anolis carolinensis ENSACAG00000008717 I
PTF1A Bos taurus ENSBTAG00000047315 I
PTF1A Callithrix jacchus ENSCJAG00000007862 I
PTF1A Cavia porcellus ENSCPOG00000022828 I
ptf1a Danio rerio ENSDARG00000014479 I
PTF1A Dasypus novemcinctus ENSDNOG00000035978 I
PTF1A Equus caballus ENSECAG00000012711 I
PTF1A Homo sapiens ENSG00000168267 D
ptf1a Gasterosteus aculeatus ENSGACG00000014760 I
PTF1A Gorilla gorilla ENSGGOG00000015210 I
PTF1A Loxodonta africana ENSLAFG00000012682 I
PTF1A Myotis lucifugus ENSMLUG00000010122 I
PTF1A Monodelphis domestica ENSMODG00000008946 I
Ptf1a Mus musculus ENSMUSG00000026735 D
PTF1A Otolemur garnettii ENSOGAG00000024685 I
ptf1a Oryzias latipes ENSORLG00000008277 I
PTF1A Procavia capensis ENSPCAG00000005440 I
Ptf1a Rattus norvegicus ENSRNOG00000016902 I
PTF1A Sus scrofa ENSSSCG00000030662 I
PTF1A Tupaia belangeri ENSTBEG00000005210 I
ptf1a Takifugu rubripes ENSTRUG00000007713 I
PTF1A Tursiops truncatus ENSTTRG00000016843 I
ptf1a Xenopus tropicalis XB-GENE-484425 I
ptf1a.S Xenopus laevis XB-GENE-6466546 I
Pvit_04136 Pogona vitticeps Pvit_04136 I
RPRC001881 Rhodnius prolixus RPRC001881 I
Sakowv30041452m.g Saccoglossus kowalevskii Sakowv30041452m.g I
SBAD_0000858001 Soboliphyme baturini SBAD_0000858001 I
SMAR009985 Strigamia maritima SMAR009985 I
SMAR011911 Strigamia maritima SMAR011911 I
SMU15024587 Schmidtea mediterranea SMU15024587 I
SMU15028020 Schmidtea mediterranea SMU15028020 I
SMU15033768 Schmidtea mediterranea SMU15033768 I
SPU_002677 Strongylocentrotus purpuratus SPU_002677 I
SROB_0001629701 Schistosoma rodhaini SROB_0001629701 I
T265_12589 Opisthorchis viverrini T265_12589 I
TC014105 Tribolium castaneum TC014105 I
TMUE_s0036001100 Trichuris muris TMUE_s0036001100 I
TTRE_0000022101 Trichuris trichiura TTRE_0000022101 I
YQE_02105 Dendroctonus ponderosae YQE_02105 I