orange1.1g020987m.g (Citrus sinensis)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 orange1.1g020987m.g T196705_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g020987m GATA 182 217
orange1.1g021178m GATA 179 214
orange1.1g023724m GATA 141 176
orange1.1g026843m GATA 95 130

Links

Other GATA family TFs
Other Citrus sinensis TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29889.m003394 Ricinus communis 29889.m003394 N
Aquca_029_00055 Aquilegia coerulea Aquca_029_00055 N
AT3G17450 Arabidopsis thaliana AT3G17450 N
Bostr.19424s0919 Boechera stricta Bostr.19424s0919 N
Cagra.4396s0051 Capsella grandiflora Cagra.4396s0051 N
Carubv10013083m.g Capsella rubella Carubv10013083m.g N
cassava36089.valid.m1 Manihot esculenta cassava36089.valid.m1 N
Ciclev10024195m.g Citrus clementina Ciclev10024195m.g N
Cucsa.252180 Cucumis sativus Cucsa.252180 N
Eucgr.B02527 Eucalyptus grandis Eucgr.B02527 N
evm.TU.supercontig_519.2 Carica papaya evm.TU.supercontig_519.2 N
gene22812-v1.0-hybrid Fragaria vesca gene22812-v1.0-hybrid N
GLYMA09G09291 Glycine max GLYMA09G09291 N
GLYMA15G21351 Glycine max GLYMA15G21351 N
Gorai.008G135400 Gossypium raimondii Gorai.008G135400 N
GSMUA_Achr3G12820_001 Musa acuminata GSMUA_Achr3G12820_001 N
LjT35D18.120.nc Lotus japonicus LjT35D18.120.nc N
MDP0000133479 Malus domestica MDP0000133479 N
MDP0000314867 Malus domestica MDP0000314867 N
orange1.1g044693m.g Citrus sinensis orange1.1g044693m.g N
PK21594.1 Cannabis sativa PK21594.1 N
Pm008491 Prunus mume Pm008491 N
POPTR_0002s18950 Populus trichocarpa POPTR_0002s18950 N
POPTR_0014s10940 Populus trichocarpa POPTR_0014s10940 N
PRUPE_ppa001126mg Prunus persica PRUPE_ppa001126mg N
SapurV1A.0014s0420 Salix purpurea SapurV1A.0014s0420 N
SapurV1A.0294s0300 Salix purpurea SapurV1A.0294s0300 N
TCM_004927 Theobroma cacao TCM_004927 N
TCM_021492 Theobroma cacao TCM_021492 N
Thhalv10020031m.g Eutrema salsugineum Thhalv10020031m.g N
VIT_05s0020g00790 Vitis vinifera VIT_05s0020g00790 N