TCM_021492 (Theobroma cacao)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 TCM_021492 T027753_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY06910 BED ZF 15 62
EOY06910 BED ZF 139 185

Links

Other BED ZF family TFs
Other Theobroma cacao TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29889.m003394 Ricinus communis 29889.m003394 N 0.940
Cagra.4396s0051 Capsella grandiflora Cagra.4396s0051 N 0.940
Carubv10013083m.g Capsella rubella Carubv10013083m.g N 0.940
Thhalv10020031m.g Eutrema salsugineum Thhalv10020031m.g N 0.940
VIT_05s0020g00790 Vitis vinifera VIT_05s0020g00790 N 0.940
Bostr.19424s0919 Boechera stricta Bostr.19424s0919 N 0.940
AT3G17450 Arabidopsis thaliana AT3G17450 N 0.916
Cucsa.252180 Cucumis sativus Cucsa.252180 N 0.905
GSMUA_Achr3G12820_001 Musa acuminata GSMUA_Achr3G12820_001 N 0.905
GLYMA09G09291 Glycine max GLYMA09G09291 N 0.904
GLYMA15G21351 Glycine max GLYMA15G21351 N 0.902
Bo00763s120 Brassica oleracea Bo00763s120 N 0.901
LjT35D18.120.nc Lotus japonicus LjT35D18.120.nc N 0.892
PK21594.1 Cannabis sativa PK21594.1 N 0.881
MDP0000314867 Malus domestica MDP0000314867 N 0.869
MDP0000133479 Malus domestica MDP0000133479 N 0.869
evm.TU.supercontig_519.2 Carica papaya evm.TU.supercontig_519.2 N 0.857
PRUPE_ppa001126mg Prunus persica PRUPE_ppa001126mg N 0.857
Pm008491 Prunus mume Pm008491 N 0.857
gene22812-v1.0-hybrid Fragaria vesca gene22812-v1.0-hybrid N 0.845
Aquca_029_00055 Aquilegia coerulea Aquca_029_00055 N 0.845
SapurV1A.0294s0300 Salix purpurea SapurV1A.0294s0300 N 0.843
Gorai.008G135400 Gossypium raimondii Gorai.008G135400 N 0.843
POPTR_0014s10940 Populus trichocarpa POPTR_0014s10940 N 0.843
orange1.1g044693m.g Citrus sinensis orange1.1g044693m.g N 0.833
Ciclev10024195m.g Citrus clementina Ciclev10024195m.g N 0.833
Eucgr.B02527 Eucalyptus grandis Eucgr.B02527 N 0.833
TCM_004927 Theobroma cacao TCM_004927 N 0.833
cassava36089.valid.m1 Manihot esculenta cassava36089.valid.m1 N 0.821
SapurV1A.0014s0420 Salix purpurea SapurV1A.0014s0420 N 0.819
POPTR_0002s18950 Populus trichocarpa POPTR_0002s18950 N 0.810