D915_04811 (Fasciola hepatica)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03615 (GCM) IPR003902 D915_04811 T198239_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.627 0.627
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.627 0.627
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.627 0.627
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.627 0.627
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
D915_04811 GCM 258 395

Links

Other GCM family TFs
Other Fasciola hepatica TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
3875_YDR174W Saccharomyces mikatae 3875_YDR174W I
4397_YDR174W Saccharomyces paradoxus 4397_YDR174W I
AGOS_AGL141W Ashbya gossypii AGOS_AGL141W I
BN7_2978 Wickerhamomyces ciferrii BN7_2978 I
CAGL0E00737g Candida glabrata CAGL0E00737g I
Ecym_4194 Eremothecium cymbalariae Ecym_4194 I
GNLVRS01_PISO0I16552g Millerozyma farinosa GNLVRS01_PISO0I16552g N
GNLVRS01_PISO0J18313g Millerozyma farinosa GNLVRS01_PISO0J18313g N
HMO1 Saccharomyces cerevisiae YDR174W D
KAFR_0B06030 Kazachstania africana KAFR_0B06030 I
KLTH0F09020g Kluyveromyces thermotolerans KLTH0F09020g I
KLTH0F09020g Lachancea thermotolerans KLTH0F09020g I
KNAG_0A04840 Kazachstania naganishii KNAG_0A04840 I
Kpol_1024p24 Vanderwaltozyma polyspora Kpol_1024p24 I
LALA0_S03e03444g Lachancea lanzarotensis LALA0_S03e03444g I
NCAS_0B03190 Naumovozyma castellii NCAS_0B03190 I
NDAI_0A01190 Naumovozyma dairenensis NDAI_0A01190 I
PAS_chr2-2_0488 Komagataella pastoris PAS_chr2-2_0488 N
SAKL0H14234g Lachancea kluyveri SAKL0H14234g I
Scas_Contig682.13 Saccharomyces castellii Scas_Contig682.13 I
SKUD_149803 Saccharomyces kudriavzevii SKUD_149803 I
SU7_2586 Saccharomyces arboricola SU7_2586 I
TBLA_0A01170 Tetrapisispora blattae TBLA_0A01170 I
TBLA_0H01020 Tetrapisispora blattae TBLA_0H01020 I
TDEL_0F04960 Torulaspora delbrueckii TDEL_0F04960 I
TPHA_0C02460 Tetrapisispora phaffii TPHA_0C02460 I
XP_002491904.1 Pichia pastoris XP_002491904.1 N
ZBAI_01315 Zygosaccharomyces bailii ZBAI_01315 I
ZBAI_09581 Zygosaccharomyces bailii ZBAI_09581 I