CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra020715
(
Brassica rapa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bra020715
T199989_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra020715.1-P
GRAS
126
497
LRADLVSCAKAMSENDLMMARSMMEKLRLMVSVSGEPIERLGAYLLEGLVAQLSSSGSSIYKSLNQCPEPASTDLLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDTTSAYARGGGLNIVGNRLAKLAKQFNVPFEFNSVSVSVSEVRPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFKETMDYYDAMFESIDVTLPRNHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIRSLLRNYSDKYRLEERDGALYLGWMRRDLVASCAWK
Links
Other
GRAS
family TFs
Other
Brassica rapa
TFs
79 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOC_0000493901
Angiostrongylus costaricensis
ACOC_0000493901
N
0.000
ALUE_0000347301
Ascaris lumbricoides
ALUE_0000347301
N
0.000
ANCCAN_14716
Ancylostoma caninum
ANCCAN_14716
N
0.000
ANCCEY_13935
Ancylostoma ceylanicum
ANCCEY_13935
N
0.000
ASIM_0001085501
Anisakis simplex
ASIM_0001085501
N
0.000
Bm6679
Brugia malayi
Bm6679
N
0.000
CBG08484
Caenorhabditis briggsae
CBG08484
N
0.000
CBN22200
Caenorhabditis brenneri
CBN22200
N
0.000
CJA15586
Caenorhabditis japonica
CJA15586
N
0.000
CRE28107
Caenorhabditis remanei
CRE28107
N
0.000
D918_02299
Trichuris suis
D918_02299
N
0.000
DICVIV_02142
Dictyocaulus viviparus
DICVIV_02142
N
0.000
DME_0000295201
Dracunculus medinensis
DME_0000295201
N
0.000
GPUH_0000076201
Gongylonema pulchrum
GPUH_0000076201
N
0.000
grh-1
Caenorhabditis elegans
WBGene00001707
N
0.000
HPLM_0001248301
Haemonchus placei
HPLM_0001248301
N
0.000
nAv.1.0.1.g04294
Acanthocheilonema viteae
nAv.1.0.1.g04294
N
0.000
NBR_0001111401
Nippostrongylus brasiliensis
NBR_0001111401
I
0.000
nDi.2.2.2.g12190
Dirofilaria immitis
nDi.2.2.2.g12190
N
0.000
NECAME_01451
Necator americanus
NECAME_01451
N
0.000
nLs.2.1.2.g09328
Litomosoides sigmodontis
nLs.2.1.2.g09328
N
0.000
PTRK_0001384100
Parastrongyloides trichosuri
PTRK_0001384100
N
0.000
RSKR_0000378600
Rhabditophanes kr3021
RSKR_0000378600
N
0.000
SMUV_0000990001
Syphacia muris
SMUV_0000990001
N
0.000
SPAL_0001441800
Strongyloides papillosus
SPAL_0001441800
N
0.000
SSTP_0000594700
Strongyloides stercoralis
SSTP_0000594700
N
0.000
TCNE_0000897001
Toxocara canis
TCNE_0000897001
N
0.000
TELCIR_08176
Teladorsagia circumcincta
TELCIR_08176
N
0.000
TMUE_s0024003700
Trichuris muris
TMUE_s0024003700
N
0.000
TMUE_s0040003800
Trichuris muris
TMUE_s0040003800
N
0.000
WBGene00238278
Onchocerca volvulus
WBGene00238278
N
0.000