CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB11G13310
(
Oryza brachyantha
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OB11G13310
T200619_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB11G13310.1
GRAS
102
464
LSDLLLAGAEAVEAGDSILASIAFLRLDDFLSGVPENSAASSFDRLAYHFDQGLRSRMSSACNGCYQPQPLPSGNMLVHQIIQELSPFVKFANFTTNQAILDATVGDMDVHVVDLNIGEGIQWSSLMSDLARCGGKSFRLTTVTGDCNDSTHDTAVRLLSEFAESLELPFQYNSIFMHNEEELHAFSEDCKGSVIVSCDTTSLYYKPLSTLQNVLLVFVKKLQPKLVVTVEEDLVRIGRGASPFSTCFVEFFFEALHHFTTVFESLASCFSGSNYETCLRLVEMELMGPRIQDFVGNYGSVRVEANASEVLEGFRACELSACNIAQARMLVGLFNRVFGVVCEKGRLALCWKSRPLISVSVWI
Links
Other
GRAS
family TFs
Other
Oryza brachyantha
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R006598
Calypte anna
Aan_R006598
I
Aan_R007949
Calypte anna
Aan_R007949
N
Afo_R006305
Aptenodytes forsteri
Afo_R006305
N
Afo_R014608
Aptenodytes forsteri
Afo_R014608
I
Alligator_sinensis_CCG000787.1
Alligator sinensis
Alligator_sinensis_CCG000787.1
I
ARNTL
Anolis carolinensis
ENSACAG00000004497
I
ARNTL
Bos taurus
ENSBTAG00000013029
I
ARNTL
Canis familiaris
ENSCAFG00000008095
I
ARNTL
Choloepus hoffmanni
ENSCHOG00000000376
I
ARNTL
Callithrix jacchus
ENSCJAG00000010162
I
ARNTL
Cavia porcellus
ENSCPOG00000008795
I
ARNTL
Dasypus novemcinctus
ENSDNOG00000003841
I
Arntl
Dipodomys ordii
ENSDORG00000015539
I
ARNTL
Equus caballus
ENSECAG00000012118
I
ARNTL
Felis catus
ENSFCAG00000010983
I
ARNTL
Homo sapiens
ENSG00000133794
D
ARNTL
Gallus gallus
ENSGALG00000005378
I
ARNTL
Gorilla gorilla
ENSGGOG00000013211
I
ARNTL
Loxodonta africana
ENSLAFG00000026673
I
ARNTL
Meleagris gallopavo
ENSMGAG00000005349
I
ARNTL
Myotis lucifugus
ENSMLUG00000008503
I
ARNTL
Macaca mulatta
ENSMMUG00000009690
I
ARNTL
Monodelphis domestica
ENSMODG00000008708
I
Arntl
Mus musculus
ENSMUSG00000055116
D
ARNTL
Oryctolagus cuniculus
ENSOCUG00000005940
I
ARNTL
Otolemur garnettii
ENSOGAG00000000736
I
ARNTL
Ochotona princeps
ENSOPRG00000004853
I
ARNTL
Pan troglodytes
ENSPTRG00000003376
I
ARNTL
Pteropus vampyrus
ENSPVAG00000006712
I
Arntl
Rattus norvegicus
ENSRNOG00000014448
D
ARNTL
Sus scrofa
ENSSSCG00000013397
I
ARNTL
Tupaia belangeri
ENSTBEG00000017387
I
ARNTL
Tursiops truncatus
ENSTTRG00000013925
I
ARNTL
Vicugna pacos
ENSVPAG00000005926
I
arntl
Xenopus tropicalis
XB-GENE-495455
I
arntl.L
Xenopus laevis
XB-GENE-17342306
I
arntl.S
Xenopus laevis
XB-GENE-495459
I
arntl1a
Danio rerio
ENSDARG00000006791
I
arntl1a
Gasterosteus aculeatus
ENSGACG00000002445
I
arntl1a
Oryzias latipes
ENSORLG00000019370
I
arntl1a
Tetraodon nigroviridis
ENSTNIG00000005490
I
arntl1a
Takifugu rubripes
ENSTRUG00000008391
I
arntl1b
Danio rerio
ENSDARG00000035732
I
ARNTL2
Anolis carolinensis
ENSACAG00000012446
N
ARNTL2
Canis familiaris
ENSCAFG00000011089
N
arntl2
Danio rerio
ENSDARG00000041381
I
ARNTL2
Felis catus
ENSFCAG00000000386
N
ARNTL2
Homo sapiens
ENSG00000029153
N
ARNTL2
Gallus gallus
ENSGALG00000014096
N
ARNTL2
Meleagris gallopavo
ENSMGAG00000013735
N
ARNTL2
Macaca mulatta
ENSMMUG00000023249
N
arntl2
Oryzias latipes
ENSORLG00000010946
I
ARNTL2
Procavia capensis
ENSPCAG00000008486
N
ARNTL2
Pan troglodytes
ENSPTRG00000004788
N
ARNTL2
Pteropus vampyrus
ENSPVAG00000013771
N
arntl2
Tetraodon nigroviridis
ENSTNIG00000012142
I
arntl2
Takifugu rubripes
ENSTRUG00000007832
I
ARNTL2
Tursiops truncatus
ENSTTRG00000012339
N
Brh_R010633
Buceros rhinoceros
Brh_R010633
I
Brh_R011091
Buceros rhinoceros
Brh_R011091
N
Cmyd_10009262
Chelonia mydas
Cmyd_10009262
I
Cmyd_10013756
Chelonia mydas
Cmyd_10013756
N
ENSAMEG00000002309
Ailuropoda melanoleuca
ENSAMEG00000002309
I
ENSAMEG00000011610
Ailuropoda melanoleuca
ENSAMEG00000011610
N
ENSAMXG00000011758
Astyanax mexicanus
ENSAMXG00000011758
I
ENSAMXG00000020233
Astyanax mexicanus
ENSAMXG00000020233
I
ENSAPLG00000003885
Anas platyrhynchos
ENSAPLG00000003885
I
ENSAPLG00000008758
Anas platyrhynchos
ENSAPLG00000008758
N
ENSBTAP00000017323-D1
Bos grunniens
ENSBTAP00000017323-D1
I
ENSCSAG00000004681
Chlorocebus sabaeus
ENSCSAG00000004681
I
ENSCSAG00000007636
Chlorocebus sabaeus
ENSCSAG00000007636
N
ENSFALG00000003942
Ficedula albicollis
ENSFALG00000003942
N
ENSFALG00000010646
Ficedula albicollis
ENSFALG00000010646
I
ENSGMOG00000008906
Gadus morhua
ENSGMOG00000008906
I
ENSLACG00000009646
Latimeria chalumnae
ENSLACG00000009646
N
ENSLOCG00000003999
Lepisosteus oculatus
ENSLOCG00000003999
I
ENSLOCG00000015224
Lepisosteus oculatus
ENSLOCG00000015224
N
ENSMEUG00000007045
Macropus eugenii
ENSMEUG00000007045
N
ENSMICG00000001229
Microcebus murinus
ENSMICG00000001229
I
ENSMPUG00000010512
Mustela putorius furo
ENSMPUG00000010512
N
ENSMPUG00000013135
Mustela putorius furo
ENSMPUG00000013135
I
ENSNLEG00000005463
Nomascus leucogenys
ENSNLEG00000005463
N
ENSNLEG00000017674
Nomascus leucogenys
ENSNLEG00000017674
I
ENSOANG00000000503
Ornithorhynchus anatinus
ENSOANG00000000503
I
ENSOARG00000007809
Ovis aries
ENSOARG00000007809
I
ENSOARG00000019779
Ovis aries
ENSOARG00000019779
N
ENSONIG00000010970
Oreochromis niloticus
ENSONIG00000010970
I
ENSONIG00000014665
Oreochromis niloticus
ENSONIG00000014665
I
ENSP00000266503
Macaca fascicularis
ENSP00000266503
N
ENSP00000384517
Macaca fascicularis
ENSP00000384517
I
ENSPANG00000004474
Papio anubis
ENSPANG00000004474
N
ENSPFOG00000008027
Poecilia formosa
ENSPFOG00000008027
I
ENSPFOG00000016287
Poecilia formosa
ENSPFOG00000016287
I
ENSPPYG00000003473
Pongo abelii
ENSPPYG00000003473
I
ENSPPYG00000004380
Pongo abelii
ENSPPYG00000004380
N
ENSPSIG00000009416
Pelodiscus sinensis
ENSPSIG00000009416
N
ENSPSIG00000013131
Pelodiscus sinensis
ENSPSIG00000013131
I
ENSSHAG00000017357
Sarcophilus harrisii
ENSSHAG00000017357
I
ENSSTOG00000022144
Ictidomys tridecemlineatus
ENSSTOG00000022144
I
ENSTGUG00000012163
Taeniopygia guttata
ENSTGUG00000012163
N
ENSTGUG00000014839
Taeniopygia guttata
ENSTGUG00000014839
I
ENSTGUG00000015954
Taeniopygia guttata
ENSTGUG00000015954
I
ENSTSYG00000000577
Tarsius syrichta
ENSTSYG00000000577
I
ENSTSYG00000005541
Tarsius syrichta
ENSTSYG00000005541
N
ENSXMAG00000001482
Xiphophorus maculatus
ENSXMAG00000001482
I
ENSXMAG00000015619
Xiphophorus maculatus
ENSXMAG00000015619
I
Gfo_R013617
Geospiza fortis
Gfo_R013617
I
Gfo_R015185
Geospiza fortis
Gfo_R015185
N
Myotis_brandtii_Arntl_10004678
Myotis brandtii
Myotis_brandtii_Arntl_10004678
I
Ogr18318
Ophisaurus gracilis
Ogr18318
I
Pvit_10294
Pogona vitticeps
Pvit_10294
I
Pvit_19389
Pogona vitticeps
Pvit_19389
N
Tal_R003521
Tyto alba
Tal_R003521
I
Tal_R011603
Tyto alba
Tal_R011603
N