POPTR_0001s16890 (Populus trichocarpa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 POPTR_0001s16890 T201163_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0001s16890.1 GRAS 166 546

Links

Other GRAS family TFs
Other Populus trichocarpa TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29706.m001281 Ricinus communis 29706.m001281 N 0.758
Aquca_076_00075 Aquilegia coerulea Aquca_076_00075 N 0.702
cassava2753.m1 Manihot esculenta cassava2753.m1 N 0.821
cassava34800.m1 Manihot esculenta cassava34800.m1 N 0.837
Ca_10004 Cicer arietinum Ca_10004 N 0.770
chr5.CM0569.130.nd Lotus japonicus chr5.CM0569.130.nd N 0.727
Ciclev10027413m.g Citrus clementina Ciclev10027413m.g N 0.733
Cucsa.360250 Cucumis sativus Cucsa.360250 N 0.716
evm.TU.supercontig_25.124 Carica papaya evm.TU.supercontig_25.124 N 0.749
gene25548-v1.0-hybrid Fragaria vesca gene25548-v1.0-hybrid N 0.796
GLYMA07G04430 Glycine max GLYMA07G04430 N 0.766
GLYMA16G01020 Glycine max GLYMA16G01020 N 0.755
Gorai.011G058900 Gossypium raimondii Gorai.011G058900 N 0.821
MDP0000308434 Malus domestica MDP0000308434 N 0.782
MTR_8g020840 Medicago truncatula MTR_8g020840 N 0.763
orange1.1g008559m.g Citrus sinensis orange1.1g008559m.g N 0.804
PGSC0003DMG400039263 Solanum tuberosum PGSC0003DMG400039263 N 0.733
PK20670.1 Cannabis sativa PK20670.1 N 0.760
Pm013263 Prunus mume Pm013263 N 0.821
POPTR_0003s06380 Populus trichocarpa POPTR_0003s06380 N 0.906
PRUPE_ppa022653mg Prunus persica PRUPE_ppa022653mg N 0.824
SapurV1A.0002s0940 Salix purpurea SapurV1A.0002s0940 N 0.887
Solyc03g123400.1 Solanum lycopersicum Solyc03g123400.1 N 0.733
TCM_029136 Theobroma cacao TCM_029136 N 0.841
VIT_09s0002g01190 Vitis vinifera VIT_09s0002g01190 N 0.824