Pavir.Hb00043 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.Hb00043 T203012_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Hb00043.1.p GRAS 333 637
Pavir.Hb00043.1.p GRAS 634 681
Pavir.Hb00043.1.p GRAS 678 939
Pavir.Hb00043.2.p GRAS 333 682

Links

Other GRAS family TFs
Other Panicum virgatum TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG014139.1 Alligator sinensis Alligator_sinensis_CCG014139.1 N 0.000
Cmyd_10005165 Chelonia mydas Cmyd_10005165 N 0.000
ENSCSAG00000008746 Chlorocebus sabaeus ENSCSAG00000008746 N 0.000
ENSMPUG00000012814 Mustela putorius furo ENSMPUG00000012814 N 0.000
ENSOARG00000010061 Ovis aries ENSOARG00000010061 N 0.000
ENSPSIG00000011562 Pelodiscus sinensis ENSPSIG00000011562 I 0.000
Ogr03452 Ophisaurus gracilis Ogr03452 N 0.000
PATZ1 Myotis lucifugus ENSMLUG00000009942 I 0.000
PATZ1 Macaca mulatta ENSMMUG00000013911 I 0.000
PATZ1 Homo sapiens ENSG00000100105 D 0.000
Patz1 Mus musculus ENSMUSG00000020453 I 0.000
PATZ1 Canis familiaris ENSCAFG00000013087 I 0.000
PATZ1 Oryctolagus cuniculus ENSOCUG00000002323 N 0.000
PATZ1 Ochotona princeps ENSOPRG00000002286 N 0.000
Patz1 Rattus norvegicus ENSRNOG00000018709 N 0.000
PATZ1 Sus scrofa ENSSSCG00000010027 N 0.000
PATZ1 Taeniopygia guttata ENSTGUG00000009749 N 0.000
PATZ1 Felis catus ENSFCAG00000030253 N 0.000
PATZ1 Equus caballus ENSECAG00000025030 N 0.000