CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Hmbox1
(
Dipodomys ordii
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSDORG00000015971
T209054_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000015024
Homeodomain
268
308
RGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVI
Links
Other
Homeodomain
family TFs
Other
Dipodomys ordii
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB000327
Anopheles albimanus
AALB000327
I
0.604
AARA005138
Anopheles arabiensis
AARA005138
I
0.604
ACEP26487
Atta cephalotes
ACEP26487
I
0.604
ACHR004287
Anopheles christyi
ACHR004287
I
0.604
ADIR006768
Anopheles dirus
ADIR006768
I
0.604
AEPI004828
Anopheles epiroticus
AEPI004828
I
0.604
AFUN001295
Anopheles funestus
AFUN001295
I
0.604
AMAM009154
Anopheles maculatus
AMAM009154
I
0.604
AMEC016887
Anopheles melas
AMEC016887
I
0.604
AMIN006279
Anopheles minimus
AMIN006279
I
0.604
ANCDUO_09759
Ancylostoma duodenale
ANCDUO_09759
I
0.604
AQUA000678
Anopheles quadriannulatus
AQUA000678
I
0.604
BGLB001705
Biomphalaria glabrata
BGLB001705
I
0.604
BGLB005976
Biomphalaria glabrata
BGLB005976
I
0.610
CGOC_0000387301
Cylicostephanus goldi
CGOC_0000387301
I
0.604
Crx
Mus musculus
ENSMUSG00000041578
D
0.609
D918_03762
Trichuris suis
D918_03762
N
0.688
EFV59137
Trichinella spiralis
EFV59137
N
0.693
ENSCING00000013809
Ciona intestinalis
ENSCING00000013809
I
0.605
ENSLACG00000003225
Latimeria chalumnae
ENSLACG00000003225
N
0.862
ENSMEUG00000002781
Macropus eugenii
ENSMEUG00000002781
I
0.604
ENSMICG00000004221
Microcebus murinus
ENSMICG00000004221
I
0.622
e_gw.814.10.1
Branchiostoma floridae
e_gw.814.10.1
I
0.604
GB40331
Apis mellifera
GB40331
I
0.604
GB42226
Apis mellifera
GB42226
I
0.604
genemark-nMf.1.1.scaf05885-processed-gene-0.2
Meloidogyne floridensis
genemark-nMf.1.1.scaf05885-processed-gene-0.2
I
0.626
HMBOX1
Sorex araneus
ENSSARG00000009365
N
0.867
HMBOX1
Ochotona princeps
ENSOPRG00000013613
N
0.844
HMBOX1
Homo sapiens
ENSG00000147421
D
0.846
Hmbox1
Mus musculus
ENSMUSG00000021972
D
0.846
HMBOX1
Microcebus murinus
ENSMICG00000010422
N
0.867
Hnf1a
Mus musculus
ENSMUSG00000029556
D
0.656
HNF1A
Homo sapiens
ENSG00000135100
D
0.676
ISCW005275
Ixodes scapularis
ISCW005275
I
0.609
ISCW017713
Ixodes scapularis
ISCW017713
I
0.604
L893_g29073
Steinernema glaseri
L893_g29073
I
0.604
LDEC010767
Leptinotarsa decemlineata
LDEC010767
I
0.604
maker-nMf.1.1.scaf05852-augustus-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf05852-augustus-gene-0.4
I
0.604
MESCA003695
Megaselia scalaris
MESCA003695
I
0.600
MhA1_Contig1070.frz3.gene23
Meloidogyne hapla
MhA1_Contig1070.frz3.gene23
I
0.604
Ogr07758
Ophisaurus gracilis
Ogr07758
N
0.824
PXEA_0000709901
Protopolystoma xenopodis
PXEA_0000709901
I
0.604
SINV23302
Solenopsis invicta
SINV23302
I
0.604
SPU_008196
Strongylocentrotus purpuratus
SPU_008196
N
0.677
SROB_0000568701
Schistosoma rodhaini
SROB_0000568701
I
0.606
SVUK_0000982701
Strongylus vulgaris
SVUK_0000982701
I
0.601
TTRE_0000607501
Trichuris trichiura
TTRE_0000607501
N
0.688