CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000004501
(
Gadus morhua
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSGMOG00000004501
T210578_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HDX
M01246_2.00
Homo sapiens
HNNNNNN
NNNNNND
PBM
Lambert et al.(2019)
pTH11271
0.692
0.800
Hdx
M00463_2.00
Mus musculus
HNWYHNN
NNDRWND
PBM
Berger et al.(2008)
Hdx_3845
0.692
0.800
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000004820
Homeodomain
2
59
NLRSVFTTEQQRVLERYYDNGMTNQSKACFQLILQCAQETKLDFSVVRTWVGNKRRKL
ENSGMOP00000004820
Homeodomain
383
442
QDRTQFSDGDLVQLRRFWNRGMTSLGFVCREKITAAANQLNVDTEIVKTWISNRRRKCRL
Links
Other
Homeodomain
family TFs
Other
Gadus morhua
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CaO19.1227
Candida albicans
CaO19.1227
I
CaO19.8813
Candida albicans
CaO19.8813
I
COCC4DRAFT_137441
Bipolaris maydis
COCC4DRAFT_137441
N
COCCADRAFT_105405
Bipolaris zeicola
COCCADRAFT_105405
N
COCMIDRAFT_94153
Bipolaris oryzae
COCMIDRAFT_94153
N
COCSADRAFT_324435
Bipolaris sorokiniana
COCSADRAFT_324435
N
COCVIDRAFT_95708
Bipolaris victoriae
COCVIDRAFT_95708
N
estExt_fgenesh1_pg.C_sca_29_chr12_4_00173
Nectria haematococca
estExt_fgenesh1_pg.C_sca_29_chr12_4_00173
N
e_gw1.9.820.1
Cochliobolus heterostrophus C5
e_gw1.9.820.1
N
PV06_10524
Exophiala oligosperma
PV06_10524
N
PV10_04412
Exophiala mesophila
PV10_04412
N
SETTUDRAFT_160687
Setosphaeria turcica
SETTUDRAFT_160687
N
Z517_04525
Fonsecaea pedrosoi
Z517_04525
I