CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSMEUG00000003167
(
Macropus eugenii
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSMEUG00000003167
T211337_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Nkx3-1
M00170_2.00
Mus musculus
NDAAGTRBNN
NNVYACTTHN
PBM
Badis et al.(2009)
Nkx3-1_2923
0.266
1.000
Nkx3-1
M00420_2.00
Mus musculus
NNAAGTRBNN
NNVYACTTNN
PBM
Berger et al.(2008)
Nkx3-1_2923
0.266
1.000
NKX3-1
M05255_2.00
Homo sapiens
NNTAAGTGSN
NSCACTTANN
SELEX
Yin et al.(2017)
NKX3-1_eDBD_HT-SELEX
0.266
1.000
NKX3-1
M09154_2.00
Homo sapiens
NYDAAGTGBYWD
HWRVCACTTHRN
Misc
Kulakovskiy et al.(2013)
NKX31_HUMAN.H11MO.0.C
0.266
1.000
Nkx3-1
M09184_2.00
Mus musculus
NYDAAGTGBYWD
HWRVCACTTHRN
Misc
Kulakovskiy et al.(2013)
NKX31_MOUSE.H11MO.0.C
0.266
1.000
NKX3-1
M09559_2.00
Homo sapiens
BTRAGTRBYY
RRVYACTYAV
Misc
Heinz et al.(2010)
LNCaP-Nkx3.1_GSE28264
0.266
1.000
NKX3-1
M10729_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GT1_Q6_01
0.266
1.000
NKX3-1
M10730_2.00
Homo sapiens
NWWTAAGTATWH
DWATACTTAWWN
Transfac
Matys et al.(2006)
V$NKX3A_01
0.266
1.000
NKX3-1
M10731_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX3A_Q3
0.266
1.000
NKX3-1
M05256_2.00
Homo sapiens
NNTAAGTGBN
NVCACTTANN
SELEX
Yin et al.(2017)
NKX3-1_eDBD_Methyl-HT-SELEX_1
0.266
1.000
NKX3-1
M05257_2.00
Homo sapiens
NTAAYSWB
VWSRTTAN
SELEX
Yin et al.(2017)
NKX3-1_eDBD_Methyl-HT-SELEX_2
0.266
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMEUP00000002888
Homeodomain
24
61
KRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKXXX
Links
Other
Homeodomain
family TFs
Other
Macropus eugenii
TFs
128 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB000327
Anopheles albimanus
AALB000327
I
0.600
AALB004801
Anopheles albimanus
AALB004801
N
0.622
Aan_R009659
Calypte anna
Aan_R009659
N
0.630
AARA005138
Anopheles arabiensis
AARA005138
I
0.600
AARA005693
Anopheles arabiensis
AARA005693
N
0.655
ACEP16435
Atta cephalotes
ACEP16435
N
0.622
ACEP26487
Atta cephalotes
ACEP26487
I
0.600
ACHR004287
Anopheles christyi
ACHR004287
I
0.600
ACUA018681
Anopheles culicifacies
ACUA018681
N
0.622
ADIR006768
Anopheles dirus
ADIR006768
I
0.600
ADIR007401
Anopheles dirus
ADIR007401
N
0.655
AEPI004567
Anopheles epiroticus
AEPI004567
N
0.655
AEPI004828
Anopheles epiroticus
AEPI004828
I
0.600
AFAF010529
Anopheles farauti
AFAF010529
N
0.664
AFUN001295
Anopheles funestus
AFUN001295
I
0.600
AFUN006141
Anopheles funestus
AFUN006141
N
0.655
AFUN006142
Anopheles funestus
AFUN006142
N
0.655
Alligator_sinensis_CCG010661.1
Alligator sinensis
Alligator_sinensis_CCG010661.1
I
0.682
AMAM009154
Anopheles maculatus
AMAM009154
I
0.600
AMEC014801
Anopheles melas
AMEC014801
N
0.604
AMEC016887
Anopheles melas
AMEC016887
I
0.600
AMIN006279
Anopheles minimus
AMIN006279
I
0.600
AMIN011034
Anopheles minimus
AMIN011034
N
0.655
ANCDUO_09759
Ancylostoma duodenale
ANCDUO_09759
I
0.599
ANCDUO_12194
Ancylostoma duodenale
ANCDUO_12194
I
0.634
AQUA000678
Anopheles quadriannulatus
AQUA000678
I
0.600
AQUA011153
Anopheles quadriannulatus
AQUA011153
N
0.655
ASTEI06400
Anopheles stephensi
ASTEI06400
N
0.655
ASU_12993
Ascaris suum
ASU_12993
I
0.601
BARX2
Tupaia belangeri
ENSTBEG00000000641
I
0.604
BARX2
Vicugna pacos
ENSVPAG00000010480
I
0.604
BGIBMGA011355
Bombyx mori
BGIBMGA011355
N
0.604
BGLB001079
Biomphalaria glabrata
BGLB001079
N
0.613
BGLB001705
Biomphalaria glabrata
BGLB001705
I
0.599
BGLB005976
Biomphalaria glabrata
BGLB005976
I
0.600
BTMF_0000212801
Brugia timori
BTMF_0000212801
I
0.630
CapteG187461
Capitella teleta
CapteG187461
I
0.603
CGOC_0000387301
Cylicostephanus goldi
CGOC_0000387301
I
0.599
CLEC012266
Cimex lectularius
CLEC012266
N
0.655
Cmyd_10016952
Chelonia mydas
Cmyd_10016952
I
0.617
CPIJ016099
Culex quinquefasciatus
CPIJ016099
N
0.622
CpipJ_CPIJ016099
Culex pipiens
CpipJ_CPIJ016099
N
0.622
Crx
Mus musculus
ENSMUSG00000041578
D
0.599
D915_01034
Fasciola hepatica
D915_01034
N
0.600
D918_03366
Trichuris suis
D918_03366
I
0.636
DBX1
Canis familiaris
ENSCAFG00000009813
N
0.604
DILT_0001226501
Diphyllobothrium latum
DILT_0001226501
I
0.621
en1
Xenopus tropicalis
XB-GENE-5737237
I
0.632
ENSACAG00000002042
Anolis carolinensis
ENSACAG00000002042
N
0.613
ENSAPLG00000006374
Anas platyrhynchos
ENSAPLG00000006374
N
0.630
ENSCING00000013809
Ciona intestinalis
ENSCING00000013809
I
0.609
ENSDNOG00000040223
Dasypus novemcinctus
ENSDNOG00000040223
I
0.640
ENSDORG00000013256
Dipodomys ordii
ENSDORG00000013256
I
0.806
ENSEEUG00000014300
Erinaceus europaeus
ENSEEUG00000014300
N
0.657
ENSFALG00000012045
Ficedula albicollis
ENSFALG00000012045
N
0.613
ENSGALG00000027554
Gallus gallus
ENSGALG00000027554
N
0.630
ENSGMOG00000002488
Gadus morhua
ENSGMOG00000002488
N
0.604
ENSMEUG00000002781
Macropus eugenii
ENSMEUG00000002781
I
0.609
ENSOPRG00000015148
Ochotona princeps
ENSOPRG00000015148
N
0.655
ENSPMAG00000010239
Petromyzon marinus
ENSPMAG00000010239
I
0.650
ENSTBEG00000005783
Tupaia belangeri
ENSTBEG00000005783
N
0.655
ENSTGUG00000002708
Taeniopygia guttata
ENSTGUG00000002708
N
0.613
ENSTGUG00000004229
Taeniopygia guttata
ENSTGUG00000004229
I
0.604
ENSTNIG00000016985
Tetraodon nigroviridis
ENSTNIG00000016985
N
0.604
ENSTNIG00000018605
Tetraodon nigroviridis
ENSTNIG00000018605
I
0.632
e_gw.5.534.1
Branchiostoma floridae
e_gw.5.534.1
I
0.640
e_gw.5.535.1
Branchiostoma floridae
e_gw.5.535.1
I
0.640
e_gw.814.10.1
Branchiostoma floridae
e_gw.814.10.1
I
0.599
GB40331
Apis mellifera
GB40331
I
0.600
GB42226
Apis mellifera
GB42226
I
0.600
Gfo_R010904
Geospiza fortis
Gfo_R010904
N
0.613
GPLIN_001352400
Globodera pallida
GPLIN_001352400
I
0.623
HDID_0000158701
Hymenolepis diminuta
HDID_0000158701
N
0.618
HLX
Echinops telfairi
ENSETEG00000003298
I
0.664
HLX
Sorex araneus
ENSSARG00000009476
I
0.664
HOXB3
Echinops telfairi
ENSETEG00000007761
I
0.636
HPLM_0001802901
Haemonchus placei
HPLM_0001802901
I
0.636
ISCW011755
Ixodes scapularis
ISCW011755
N
0.603
ISCW017713
Ixodes scapularis
ISCW017713
I
0.600
L798_10069
Zootermopsis nevadensis
L798_10069
N
0.622
L892_g18619
Steinernema scapterisci
L892_g18619
N
0.613
L892_g2163
Steinernema scapterisci
L892_g2163
N
0.692
LCUP015731
Lucilia cuprina
LCUP015731
N
0.604
LDEC001243
Leptinotarsa decemlineata
LDEC001243
I
0.649
LDEC001875
Leptinotarsa decemlineata
LDEC001875
N
0.604
LDEC010767
Leptinotarsa decemlineata
LDEC010767
I
0.600
lmx1a
Danio rerio
ENSDARG00000020354
I
0.624
maker-nMf.1.1.scaf07538-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf07538-augustus-gene-0.6
N
0.608
MCINX013655
Melitaea cinxia
MCINX013655
N
0.630
MESCA002384
Megaselia scalaris
MESCA002384
I
0.643
MESCA003695
Megaselia scalaris
MESCA003695
I
0.599
MhA1_Contig138.frz3.gene24
Meloidogyne hapla
MhA1_Contig138.frz3.gene24
I
0.602
MICALL2
Takifugu rubripes
ENSTRUG00000013527
I
0.632
Minc09570
Meloidogyne incognita
Minc09570
I
0.634
Myotis_brandtii_MIMI_L668_10004071
Myotis brandtii
Myotis_brandtii_MIMI_L668_10004071
I
0.608
Myotis_brandtii_MIMI_R196_10004074
Myotis brandtii
Myotis_brandtii_MIMI_R196_10004074
I
0.608
nDi.2.2.2.g11780
Dirofilaria immitis
nDi.2.2.2.g11780
I
0.614
nDi.2.2.2.g12576
Dirofilaria immitis
nDi.2.2.2.g12576
I
0.601
NEMVEDRAFT_v1g81249
Nematostella vectensis
NEMVEDRAFT_v1g81249
I
0.619
NEMVEDRAFT_v1g94003
Nematostella vectensis
NEMVEDRAFT_v1g94003
N
0.600
nkx2-4
Xenopus tropicalis
XB-GENE-487481
I
0.618
NKX3-1
Echinops telfairi
ENSETEG00000018790
I
0.266
nkx3.2
Takifugu rubripes
ENSTRUG00000014438
I
0.836
Ocbimv22038272m.g
Octopus bimaculoides
Ocbimv22038272m.g
N
0.664
OFLC_0001568201
Onchocerca flexuosa
OFLC_0001568201
I
0.614
Pitx1
Mus musculus
ENSMUSG00000021506
D
0.599
PK01458.1
Cannabis sativa
PK01458.1
N
0.629
PPAI003680
Phlebotomus papatasi
PPAI003680
N
0.630
PXEA_0000709901
Protopolystoma xenopodis
PXEA_0000709901
I
0.599
RPRC011993
Rhodnius prolixus
RPRC011993
N
0.604
Sakowv30000867m.g
Saccoglossus kowalevskii
Sakowv30000867m.g
I
0.601
SBAD_0000059701
Soboliphyme baturini
SBAD_0000059701
N
0.604
SBAD_0000661201
Soboliphyme baturini
SBAD_0000661201
I
0.651
scaffold37-EXSNAP2012.8
Pristionchus exspectatus
scaffold37-EXSNAP2012.8
N
0.611
SCUD_0000356901
Schistosoma curassoni
SCUD_0000356901
N
0.616
SCUD_0002251201
Schistosoma curassoni
SCUD_0002251201
I
0.616
SINV13310
Solenopsis invicta
SINV13310
N
0.655
SINV23302
Solenopsis invicta
SINV23302
I
0.600
SPER_0000200201
Spirometra erinaceieuropaei
SPER_0000200201
N
0.650
SPER_0003668801
Spirometra erinaceieuropaei
SPER_0003668801
I
0.630
SSLN_0001021301
Schistocephalus solidus
SSLN_0001021301
I
0.621
SSLN_0001900001
Schistocephalus solidus
SSLN_0001900001
N
0.617
T265_04102
Opisthorchis viverrini
T265_04102
N
0.637
TMUE_s0047002700
Trichuris muris
TMUE_s0047002700
I
0.644
TMUE_s0096002400
Trichuris muris
TMUE_s0096002400
I
0.616
TRE_0001634301
Trichobilharzia regenti
TRE_0001634301
N
0.617
TRE_0001706901
Trichobilharzia regenti
TRE_0001706901
I
0.621
TRE_0001854501
Trichobilharzia regenti
TRE_0001854501
N
0.735