GSMUA_Achr7G01060_001 (Musa acuminata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GSMUA_Achr7G01060_001 T219195_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-9
M06898_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
PHV_col_a 		0.864 0.946
ATHB-9
M02682_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 SELEX
Mathelier et al.(2014)
MA0573.1 		0.864 0.946
ATHB-9
M10623_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 Transfac
Matys et al.(2006)
P$ATHB9_01 		0.864 0.946
ATHB-15
M00864_2.00 		Arabidopsis thaliana
AATAATTACT
AGTAATTATT		 PBM
Franco-Zorrilla et al.(2014)
ICU4 		0.860 0.911
ATHB-15
M06899_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
ATHB15_col_a 		0.860 0.911
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr7P01060_001 Homeodomain 24 83

Links

Other Homeodomain family TFs
Other Musa acuminata TFs

335 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A_02303 Schistosoma haematobium A_02303 I 0.000
CPUR_04901 Claviceps purpurea CPUR_04901 I 0.000
CTHT_0053790 Chaetomium thermophilum CTHT_0053790 I 0.000
DILT_0001682001 Diphyllobothrium latum DILT_0001682001 N 0.000
ECPE_0001729301 Echinostoma caproni ECPE_0001729301 N 0.000
estExt_fgenesh3_kg.C_40082 Neurospora discreta estExt_fgenesh3_kg.C_40082 I 0.000
gw1.199.74.1 Physcomitrella patens gw1.199.74.1 I 0.000
MYCTH_2294934 Myceliophthora thermophila MYCTH_2294934 I 0.000
NCU02819 Neurospora crassa NCU02819 D 0.000
NEUTE1DRAFT_106544 Neurospora tetrasperma NEUTE1DRAFT_106544 I 0.000
PODANS_1_7390 Podospora anserina PODANS_1_7390 I 0.000
SCUD_0001691501 Schistosoma curassoni SCUD_0001691501 I 0.000
Sjc_0021990 Schistosoma japonicum Sjc_0021990 I 0.000
SMAC_00615 Sordaria macrospora SMAC_00615 I 0.000
Smp_173650 Schistosoma mansoni Smp_173650 I 0.000
SMTD_0001766201 Schistosoma mattheei SMTD_0001766201 I 0.000
SROB_0001231001 Schistosoma rodhaini SROB_0001231001 I 0.000
THITE_2121767 Thielavia terrestris THITE_2121767 I 0.000
TRE_0001526701 Trichobilharzia regenti TRE_0001526701 N 0.000