GSMUA_Achr8G22800_001 (Musa acuminata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GSMUA_Achr8G22800_001 T219228_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAT22
M06926_2.00 		Arabidopsis thaliana
NNYAATCATT
AATGATTRNN		 Dap-seq
OMalley et al.(2016)
HAT22_col_a 		0.828 0.807
HAT2
M06929_2.00 		Arabidopsis thaliana
NHAATGATTRN
NYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT2_colamp_a 		0.795 0.807
HAT2
M06930_2.00 		Arabidopsis thaliana
WNYAATCATWD
HWATGATTRNW		 Dap-seq
OMalley et al.(2016)
HAT2_col_v31 		0.795 0.807
HAT1
M02047_2.00 		Arabidopsis thaliana
NMATGATTRN
NYAATCATKN		 PBM
Weirauch et al.(2014)
pTH8107 		0.793 0.772
HAT1
M06922_2.00 		Arabidopsis thaliana
NHAATGATTRNNWDW
WHWNNYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT1_col_a 		0.793 0.772
HAT1
M06923_2.00 		Arabidopsis thaliana
NYAATCATTDN
NHAATGATTRN		 Dap-seq
OMalley et al.(2016)
HAT1_colamp_a 		0.793 0.772
ATHB-X
M06902_2.00 		Arabidopsis thaliana
HHAATRATTRN
NYAATYATTDD		 Dap-seq
OMalley et al.(2016)
ATHB18_col_a 		0.772 0.684
ATHB-X
M06903_2.00 		Arabidopsis thaliana
NYAATGATTRV
BYAATCATTRN		 Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a 		0.772 0.684
ATHB-4
M01065_2.00 		Arabidopsis thaliana
NBMTGCATRNN
NNYATGCAKVN		 PBM
Sullivan et al.(2014)
pTH8184 		0.767 0.842
ATHB-4
M02042_2.00 		Arabidopsis thaliana
NNWTNATTRN
NYAATNAWNN		 PBM
Weirauch et al.(2014)
pTH8667 		0.767 0.842
HAT3
M00728_2.00 		Arabidopsis thaliana
DTGATTRV
BYAATCAH		 PBM
Chang et al.(2013)
pTH7400 		0.767 0.842
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr8P22800_001 Homeodomain 100 156

Links

Other Homeodomain family TFs
Other Musa acuminata TFs

694 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC232321.1_FG008 Zea mays AC232321.1_FG008 N 0.000
BGIOSGA021810 Oryza indica BGIOSGA021810 N 0.000
BGIOSGA021811 Oryza indica BGIOSGA021811 N 0.000
BGIOSGA021812 Oryza indica BGIOSGA021812 N 0.000
BGIOSGA021814 Oryza indica BGIOSGA021814 N 0.000
F775_03070 Aegilops tauschii F775_03070 I 0.000
F775_23221 Aegilops tauschii F775_23221 N 0.000
F775_23301 Aegilops tauschii F775_23301 N 0.000
F775_23426 Aegilops tauschii F775_23426 N 0.000
GRMZM2G121111 Zea mays GRMZM2G121111 I 0.000
LPERR06G12060 Leersia perrieri LPERR06G12060 N 0.000
OB06G14500 Oryza brachyantha OB06G14500 N 0.000
OGLUM06G05040 Oryza glumaepatula OGLUM06G05040 N 0.000
ONIVA06G15060 Oryza nivara ONIVA06G15060 N 0.000
ONIVA06G15070 Oryza nivara ONIVA06G15070 N 0.000
OPUNC06G04640 Oryza punctata OPUNC06G04640 I 0.000
ORGLA06G0044500 Oryza glaberrima ORGLA06G0044500 N 0.000
ORGLA06G0044900 Oryza glaberrima ORGLA06G0044900 N 0.000
ORUFI06G04920 Oryza rufipogon ORUFI06G04920 N 0.000
Pavir.Ca01208 Panicum virgatum Pavir.Ca01208 N 0.000
Pavir.Ca01211 Panicum virgatum Pavir.Ca01211 N 0.000
Pavir.Ca01212 Panicum virgatum Pavir.Ca01212 N 0.000
Pavir.Ga00772 Panicum virgatum Pavir.Ga00772 N 0.000
Pavir.J00200 Panicum virgatum Pavir.J00200 N 0.000
Pavir.J00203 Panicum virgatum Pavir.J00203 N 0.000
Pavir.J01189 Panicum virgatum Pavir.J01189 I 0.000
Sb01g029290 Sorghum bicolor Sb01g029290 N 0.000
Sb09g003290 Sorghum bicolor Sb09g003290 N 0.000
Sb09g003300 Sorghum bicolor Sb09g003300 N 0.000
Sb10g007420 Sorghum bicolor Sb10g007420 N 0.000
Sb10g009580 Sorghum bicolor Sb10g009580 I 0.000
Si007873m.g Setaria italica Si007873m.g N 0.000
Si007889m.g Setaria italica Si007889m.g I 0.000
Si015542m.g Setaria italica Si015542m.g N 0.000
Si023710m.g Setaria italica Si023710m.g N 0.000
Si025176m.g Setaria italica Si025176m.g I 0.000
Si032375m.g Setaria italica Si032375m.g N 0.000
Si032599m.g Setaria italica Si032599m.g I 0.000
Traes_1AL_FF8F7A939 Triticum aestivum Traes_1AL_FF8F7A939 N 0.000
TRIUR3_31433 Triticum urartu TRIUR3_31433 N 0.000
TRIUR3_33433 Triticum urartu TRIUR3_33433 N 0.000