LotgiG70713 (Lottia gigantea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 LotgiG70713 T220166_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ESX1
M00291_2.00 		Homo sapiens
NNTRATNRN
NYNATYANN		 PBM
Barrera et al.(2016)
ESX1_K193R 		0.629 0.439
ENSTNIG00000017092
M02109_2.00 		Tetraodon nigroviridis
YYAATCAD
HTGATTRR		 PBM
Weirauch et al.(2014)
pTH6064 		0.619 0.368
Hmx2
M00507_2.00 		Mus musculus
NHRANYGNNN
NNNCRNTYDN		 PBM
Berger et al.(2008)
Hmx2_3424 		0.616 0.368
Hmx1
M00524_2.00 		Mus musculus
NHDAKYRNNN
NNNYRMTHDN		 PBM
Berger et al.(2008)
Hmx1_3423 		0.616 0.368
HMX1
M03243_2.00 		Homo sapiens
NNTTAAKTGNY
RNCAMTTAANN		 SELEX
Jolma et al.(2013)
HMX1_1 		0.616 0.368
HMX2
M03234_2.00 		Homo sapiens
NNTTAAKTGNN
NNCAMTTAANN		 SELEX
Jolma et al.(2013)
HMX2_1 		0.616 0.368
HMX3
M03233_2.00 		Homo sapiens
NNNTAAKTGNN
NNCAMTTANNN		 SELEX
Jolma et al.(2013)
HMX3_1 		0.616 0.368
Hmx
M03882_2.00 		Drosophila melanogaster
NYRAKYGN
NCRMTYRN		 SELEX
Nitta et al.(2015)
Hmx_1 		0.616 0.368
HMX1
M05392_2.00 		Homo sapiens
BNYAAKTGN
NCAMTTRNV		 SELEX
Yin et al.(2017)
HMX1_eDBD_HT-SELEX 		0.616 0.368
HMX2
M05373_2.00 		Homo sapiens
GNHRAKYGS
SCRMTYDNC		 SELEX
Yin et al.(2017)
HMX2_eDBD_HT-SELEX 		0.616 0.368
HMX2
M05375_2.00 		Homo sapiens
NTTAAKTGNN
NNCAMTTAAN		 SELEX
Yin et al.(2017)
HMX2_FL_HT-SELEX 		0.616 0.368
Hmx
M06554_2.00 		Drosophila melanogaster
TTAATTG
CAATTAA		 B1H
Mathelier et al.(2014)
MA0192.1 		0.616 0.368
Hmx
M06386_2.00 		Drosophila melanogaster
TTAATTG
CAATTAA		 B1H
Zhu et al.(2011)
Hmx_Cell_FBgn0085448 		0.616 0.368
Hmx
M06387_2.00 		Drosophila melanogaster
TTAATTG
CAATTAA		 B1H
Zhu et al.(2011)
Hmx_SOLEXA_FBgn0085448 		0.616 0.368
HMX3
M10754_2.00 		Homo sapiens
CAAGTGCGTG
CACGCACTTG		 Transfac
Matys et al.(2006)
V$HMX1_01 		0.616 0.368
HMX1
M05393_2.00 		Homo sapiens
VNYAAKTGB
VCAMTTRNB		 SELEX
Yin et al.(2017)
HMX1_eDBD_Methyl-HT-SELEX 		0.616 0.368
HMX2
M05374_2.00 		Homo sapiens
NNTAAKTGN
NCAMTTANN		 SELEX
Yin et al.(2017)
HMX2_eDBD_Methyl-HT-SELEX 		0.616 0.368
HMX2
M05376_2.00 		Homo sapiens
NTTAAKTGNN
NNCAMTTAAN		 SELEX
Yin et al.(2017)
HMX2_FL_Methyl-HT-SELEX 		0.616 0.368
repo
M03826_2.00 		Drosophila melanogaster
VTTAATTARB
VYTAATTAAB		 SELEX
Nitta et al.(2015)
repo_1 		0.615 0.456
repo
M03827_2.00 		Drosophila melanogaster
VKYAATTRRN
NYYAATTRMB		 SELEX
Nitta et al.(2015)
repo_2 		0.615 0.456
repo
M03828_2.00 		Drosophila melanogaster
VBYAATTRVNNBYAATTRVB
VBYAATTRVNNBYAATTRVB		 SELEX
Nitta et al.(2015)
repo_3 		0.615 0.456
repo
M06511_2.00 		Drosophila melanogaster
TTAATTA
TAATTAA		 B1H
Mathelier et al.(2014)
MA0240.1 		0.615 0.456
repo
M06301_2.00 		Drosophila melanogaster
DTTAATTA
TAATTAAH		 B1H
Zhu et al.(2011)
Repo_Cell_FBgn0011701 		0.615 0.456
repo
M06302_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Zhu et al.(2011)
Repo_SOLEXA_FBgn0011701 		0.615 0.456
prd-b
M02077_2.00 		Ciona intestinalis
NTRATTRNN
NNYAATYAN		 PBM
Weirauch et al.(2014)
pTH6284 		0.605 0.404
en
M03793_2.00 		Drosophila melanogaster
NTAATTRN
NYAATTAN		 SELEX
Nitta et al.(2015)
en_1 		0.604 0.386
en
M06485_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Mathelier et al.(2014)
MA0220.1 		0.604 0.386
en
M06236_2.00 		Drosophila melanogaster
NYTAATTR
YAATTARN		 B1H
Zhu et al.(2011)
En_Cell_FBgn0000577 		0.604 0.386
en
M06237_2.00 		Drosophila melanogaster
DBTAATKR
YMATTAVH		 B1H
Zhu et al.(2011)
en_FlyReg_FBgn0000577 		0.604 0.386
en
M06238_2.00 		Drosophila melanogaster
NNNTAATTRN
NYAATTANNN		 B1H
Zhu et al.(2011)
en_SOLEXA_2_FBgn0000577 		0.604 0.386
en
M06239_2.00 		Drosophila melanogaster
NTAATTR
YAATTAN		 B1H
Zhu et al.(2011)
En_SOLEXA_FBgn0000577 		0.604 0.386
en
M09677_2.00 		Drosophila melanogaster
HTAATTRN
NYAATTAD		 Misc
Kulakovskiy et al.(2009)
en 		0.604 0.386
en
M10785_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$EN_Q6 		0.604 0.386
inv
M06491_2.00 		Drosophila melanogaster
DYTAATTR
YAATTARH		 B1H
Mathelier et al.(2014)
MA0229.1 		0.604 0.368
inv
M06255_2.00 		Drosophila melanogaster
DYTAATTR
YAATTARH		 B1H
Zhu et al.(2011)
Inv_Cell_FBgn0001269 		0.604 0.368
inv
M06256_2.00 		Drosophila melanogaster
NHTAATTRV
BYAATTADN		 B1H
Zhu et al.(2011)
inv_SOLEXA_2_FBgn0001269 		0.604 0.368
inv
M06257_2.00 		Drosophila melanogaster
NHTAATTRV
BYAATTADN		 B1H
Zhu et al.(2011)
inv_SOLEXA_5_FBgn0001269 		0.604 0.368
Hmx3_CONSTRUCT
M00537_2.00 		PBM CONSTRUCTS
NHDADYRNN
NNYRHTHDN		 PBM
Berger et al.(2008)
Hmx3_3490 		0.603 0.351
CBG07641
M02063_2.00 		Caenorhabditis briggsae
NBTAATTAVN
NBTAATTAVN		 PBM
Weirauch et al.(2014)
pTH6520 		0.601 0.456
Dr
M00555_2.00 		Drosophila melanogaster
TAATTRNN
NNYAATTA		 PBM
Busser et al.(2012a)
Msh 		0.600 0.386
Dr
M06482_2.00 		Drosophila melanogaster
TAATTGS
SCAATTA		 B1H
Mathelier et al.(2014)
MA0188.1 		0.600 0.386
Dr
M06229_2.00 		Drosophila melanogaster
TAATTGSHB
VDSCAATTA		 B1H
Zhu et al.(2011)
Dr_Cell_FBgn0000492 		0.600 0.386
Dr
M06230_2.00 		Drosophila melanogaster
TAATTR
YAATTA		 B1H
Zhu et al.(2011)
Dr_SOLEXA_FBgn0000492 		0.600 0.386
Lbx2
M00465_2.00 		Mus musculus
NHAABNRN
NYNVTTDN		 PBM
Berger et al.(2008)
Lbx2_3869 		0.600 0.351
LBX2
M03224_2.00 		Homo sapiens
TAAYYRSNTYNAB
VTNRANSYRRTTA		 SELEX
Jolma et al.(2013)
LBX2_1 		0.600 0.351
LBX2
M03225_2.00 		Homo sapiens
NNTAATTRVN
NBYAATTANN		 SELEX
Jolma et al.(2013)
LBX2_2 		0.600 0.351
LBX2
M05321_2.00 		Homo sapiens
HTAAYRAG
CTYRTTAD		 SELEX
Yin et al.(2017)
LBX2_eDBD_HT-SELEX_1 		0.600 0.351
LBX2
M05322_2.00 		Homo sapiens
NTAATTAAYKRG
CYMRTTAATTAN		 SELEX
Yin et al.(2017)
LBX2_eDBD_HT-SELEX_2 		0.600 0.351
LBX2
M05323_2.00 		Homo sapiens
VYTAATTRGB
VCYAATTARB		 SELEX
Yin et al.(2017)
LBX2_eDBD_HT-SELEX_3 		0.600 0.351
LBX2
M05324_2.00 		Homo sapiens
HTAAYGAG
CTCRTTAD		 SELEX
Yin et al.(2017)
LBX2_eDBD_Methyl-HT-SELEX_1 		0.600 0.351
LBX2
M05325_2.00 		Homo sapiens
ATAATTAATKAG
CTMATTAATTAT		 SELEX
Yin et al.(2017)
LBX2_eDBD_Methyl-HT-SELEX_2 		0.600 0.351
LBX2
M05326_2.00 		Homo sapiens
NNTAATKRDN
NHYMATTANN		 SELEX
Yin et al.(2017)
LBX2_eDBD_Methyl-HT-SELEX_3 		0.600 0.351
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP70713 Homeodomain 1 57

Links

Other Homeodomain family TFs
Other Lottia gigantea TFs

677 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R015690 Calypte anna Aan_R015690 N
Afo_R011128 Aptenodytes forsteri Afo_R011128 N
Alligator_sinensis_CCG000339.1 Alligator sinensis Alligator_sinensis_CCG000339.1 N
Brh_R004704 Buceros rhinoceros Brh_R004704 N
Cmyd_10009540 Chelonia mydas Cmyd_10009540 N
ENSAPLG00000005061 Anas platyrhynchos ENSAPLG00000005061 N
ENSFALG00000005449 Ficedula albicollis ENSFALG00000005449 N
ENSGMOG00000018396 Gadus morhua ENSGMOG00000018396 N
ENSMEUG00000001198 Macropus eugenii ENSMEUG00000001198 N
ENSMEUG00000015507 Macropus eugenii ENSMEUG00000015507 N
ENSPSIG00000004000 Pelodiscus sinensis ENSPSIG00000004000 N
ENSSHAG00000011174 Sarcophilus harrisii ENSSHAG00000011174 N
ENSSHAG00000015101 Sarcophilus harrisii ENSSHAG00000015101 N
Gfo_R005319 Geospiza fortis Gfo_R005319 N
Ogr04942 Ophisaurus gracilis Ogr04942 N
PLAGL1 Monodelphis domestica ENSMODG00000017250 N
PLAGL2 Taeniopygia guttata ENSTGUG00000006525 N
PLAGL2 Monodelphis domestica ENSMODG00000019464 N
PLAGL2 Meleagris gallopavo ENSMGAG00000007476 N
PLAGL2 Gallus gallus ENSGALG00000006586 N
Pvit_11206 Pogona vitticeps Pvit_11206 N
Tal_R000481 Tyto alba Tal_R000481 N