Hmx3_CONSTRUCT (PBM CONSTRUCTS)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Hmx3_CONSTRUCT T226925_2.00 HughesLab (2013-Jun-13)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmx3_CONSTRUCT
M00537_2.00		 PBM CONSTRUCTS
NHDADYRNN
NNYRHTHDN		 PBM
Berger et al.(2008)
Hmx3_3490		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HMX3
M03233_2.00 		Homo sapiens
NNNTAAKTGNN
NNCAMTTANNN		 SELEX
Jolma et al.(2013)
HMX3_1 		0.853 1.000
HMX3
M10754_2.00 		Homo sapiens
CAAGTGCGTG
CACGCACTTG		 Transfac
Matys et al.(2006)
V$HMX1_01 		0.853 1.000
Hmx1
M00524_2.00 		Mus musculus
NHDAKYRNNN
NNNYRMTHDN		 PBM
Berger et al.(2008)
Hmx1_3423 		0.847 0.946
HMX1
M03243_2.00 		Homo sapiens
NNTTAAKTGNY
RNCAMTTAANN		 SELEX
Jolma et al.(2013)
HMX1_1 		0.847 0.946
Hmx
M03882_2.00 		Drosophila melanogaster
NYRAKYGN
NCRMTYRN		 SELEX
Nitta et al.(2015)
Hmx_1 		0.847 0.946
HMX1
M05392_2.00 		Homo sapiens
BNYAAKTGN
NCAMTTRNV		 SELEX
Yin et al.(2017)
HMX1_eDBD_HT-SELEX 		0.847 0.946
Hmx
M06554_2.00 		Drosophila melanogaster
TTAATTG
CAATTAA		 B1H
Mathelier et al.(2014)
MA0192.1 		0.847 0.946
Hmx
M06386_2.00 		Drosophila melanogaster
TTAATTG
CAATTAA		 B1H
Zhu et al.(2011)
Hmx_Cell_FBgn0085448 		0.847 0.946
Hmx
M06387_2.00 		Drosophila melanogaster
TTAATTG
CAATTAA		 B1H
Zhu et al.(2011)
Hmx_SOLEXA_FBgn0085448 		0.847 0.946
HMX1
M05393_2.00 		Homo sapiens
VNYAAKTGB
VCAMTTRNB		 SELEX
Yin et al.(2017)
HMX1_eDBD_Methyl-HT-SELEX 		0.847 0.946
Hmx2
M00507_2.00 		Mus musculus
NHRANYGNNN
NNNCRNTYDN		 PBM
Berger et al.(2008)
Hmx2_3424 		0.832 0.911
HMX2
M03234_2.00 		Homo sapiens
NNTTAAKTGNN
NNCAMTTAANN		 SELEX
Jolma et al.(2013)
HMX2_1 		0.832 0.911
HMX2
M05373_2.00 		Homo sapiens
GNHRAKYGS
SCRMTYDNC		 SELEX
Yin et al.(2017)
HMX2_eDBD_HT-SELEX 		0.832 0.911
HMX2
M05375_2.00 		Homo sapiens
NTTAAKTGNN
NNCAMTTAAN		 SELEX
Yin et al.(2017)
HMX2_FL_HT-SELEX 		0.832 0.911
HMX2
M05374_2.00 		Homo sapiens
NNTAAKTGN
NCAMTTANN		 SELEX
Yin et al.(2017)
HMX2_eDBD_Methyl-HT-SELEX 		0.832 0.911
HMX2
M05376_2.00 		Homo sapiens
NTTAAKTGNN
NNCAMTTAAN		 SELEX
Yin et al.(2017)
HMX2_FL_Methyl-HT-SELEX 		0.832 0.911
HOXC4
M00330_2.00 		Homo sapiens
YTAATTRB
VYAATTAR		 PBM
Barrera et al.(2016)
HOXC4_REF 		0.679 0.518
Hoxc4
M00530_2.00 		Mus musculus
NWAATNDNN
NNHNATTWN		 PBM
Berger et al.(2008)
Hoxc4_3491 		0.679 0.518
HOXC4
M05385_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXC4_FL_HT-SELEX 		0.679 0.518
HOXC4
M00328_2.00 		Homo sapiens
YTAATTAB
VTAATTAR		 PBM
Barrera et al.(2016)
HOXC4_N178S 		0.679 0.518
HOXC4
M00329_2.00 		Homo sapiens
NTAATKRNN
NNYMATTAN		 PBM
Barrera et al.(2016)
HOXC4_R158L 		0.679 0.518
HOXC4
M05386_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_1 		0.679 0.518
HOXC4
M05387_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_2 		0.679 0.518
TLX2
M02087_2.00 		Homo sapiens
NYRDNNNNNN
NNNNNNHYRN		 PBM
Weirauch et al.(2014)
pTH6482 		0.672 0.607
Tlx2
M00526_2.00 		Mus musculus
WTTAAWTA
TAWTTAAW		 PBM
Berger et al.(2008)
Tlx2_3498 		0.672 0.607
TLX2
M05020_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
TLX2_eDBD_HT-SELEX 		0.672 0.607
TLX2
M10672_2.00 		Homo sapiens
BNGTAAKDNB
VNHMTTACNV		 Transfac
Matys et al.(2006)
V$NCX_01 		0.672 0.607
TLX2
M05021_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
TLX2_eDBD_Methyl-HT-SELEX 		0.672 0.607
C15
M06505_2.00 		Drosophila melanogaster
TTAAWKR
YMWTTAA		 B1H
Mathelier et al.(2014)
MA0170.1 		0.672 0.571
C15
M06289_2.00 		Drosophila melanogaster
BTTAAWKR
YMWTTAAV		 B1H
Zhu et al.(2011)
C15_Cell_FBgn0004863 		0.672 0.571
C15
M06290_2.00 		Drosophila melanogaster
NWTAAWKR
YMWTTAWN		 B1H
Zhu et al.(2011)
C15_SOLEXA_FBgn0004863 		0.672 0.571
Hoxa4
M00383_2.00 		Mus musculus
NTAATBDNN
NNHVATTAN		 PBM
Berger et al.(2008)
Hoxa4_3426 		0.667 0.518
HOXA4
M05381_2.00 		Homo sapiens
NTAATKRY
RYMATTAN		 SELEX
Yin et al.(2017)
HOXA4_eDBD_HT-SELEX 		0.667 0.518
HOXA4
M10755_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA4_Q2 		0.667 0.518
HOXA4
M05382_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXA4_eDBD_Methyl-HT-SELEX 		0.667 0.518
Hoxb4
M00479_2.00 		Mus musculus
NTAATNDNN
NNHNATTAN		 PBM
Berger et al.(2008)
Hoxb4_2627 		0.667 0.500
HOXB4
M05343_2.00 		Homo sapiens
YTAATKAY
RTMATTAR		 SELEX
Yin et al.(2017)
HOXB4_FL_HT-SELEX 		0.667 0.500
HOXD4
M05273_2.00 		Homo sapiens
NTMATKRV
BYMATKAN		 SELEX
Yin et al.(2017)
HOXD4_eDBD_HT-SELEX 		0.667 0.500
HOXD4
M05276_2.00 		Homo sapiens
NTAATKRB
VYMATTAN		 SELEX
Yin et al.(2017)
HOXD4_FL_HT-SELEX 		0.667 0.500
HOXB4
M09162_2.00 		Homo sapiens
YTAATKRS
SYMATTAR		 Misc
Kulakovskiy et al.(2013)
HXB4_HUMAN.H11MO.0.B 		0.667 0.500
Hoxb4
M09204_2.00 		Mus musculus
YTAATKRS
SYMATTAR		 Misc
Kulakovskiy et al.(2013)
HXB4_MOUSE.H11MO.0.A 		0.667 0.500
Hoxb4
M09576_2.00 		Mus musculus
TGATDRATKRSN
NSYMATYHATCA		 Misc
Heinz et al.(2010)
ES-Hoxb4_GSE34014 		0.667 0.500
HOXB4
M05344_2.00 		Homo sapiens
HTAAYGAY
RTCRTTAD		 SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_1 		0.667 0.500
HOXB4
M05345_2.00 		Homo sapiens
HTAAYKAB
VTMRTTAD		 SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_2 		0.667 0.500
HOXD4
M05274_2.00 		Homo sapiens
NTMATKRN
NYMATKAN		 SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_1 		0.667 0.500
HOXD4
M05275_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_2 		0.667 0.500
HOXD4
M05277_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_1 		0.667 0.500
HOXD4
M05278_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_2 		0.667 0.500
lin-39
M08211_2.00 		Caenorhabditis elegans
GATTGATG
CATCAATC		 ChIP-seq
Contrino et al.(2012)
Mw154 		0.658 0.518
lin-39
M09582_2.00 		Caenorhabditis elegans
DTGATWRATK
MATYWATCAH		 Misc
Heinz et al.(2010)
cElegans.L3-LIN39_modEncode 		0.658 0.518
lms
M03863_2.00 		Drosophila melanogaster
BTAATTRV
BYAATTAV		 SELEX
Nitta et al.(2015)
CG13424_1 		0.640 0.571
lms
M03864_2.00 		Drosophila melanogaster
HTWATTRDWTDATTRR
YYAATHAWHYAATWAD		 SELEX
Nitta et al.(2015)
lms_1 		0.640 0.571
lms
M06536_2.00 		Drosophila melanogaster
YTAATKR
YMATTAR		 B1H
Mathelier et al.(2014)
MA0175.1 		0.640 0.571
lms
M06347_2.00 		Drosophila melanogaster
NYTAATKR
YMATTARN		 B1H
Zhu et al.(2011)
CG13424_Cell_FBgn0034520 		0.640 0.571
lms
M06348_2.00 		Drosophila melanogaster
NNHTAATDRN
NYHATTADNN		 B1H
Zhu et al.(2011)
CG13424_SOLEXA_2_FBgn0034520 		0.640 0.571
lms
M06349_2.00 		Drosophila melanogaster
YTAATKR
YMATTAR		 B1H
Zhu et al.(2011)
CG13424_SOLEXA_FBgn0034520 		0.640 0.571
TLX3
M05233_2.00 		Homo sapiens
NAATKGNNNNNNNNNNNNNCAATTN
NAATTGNNNNNNNNNNNNNCMATTN		 SELEX
Yin et al.(2017)
TLX3_eDBD_HT-SELEX 		0.639 0.589
TLX3
M05235_2.00 		Homo sapiens
NAATTGNNNNNHNNNNCAATTN
NAATTGNNNNDNNNNNCAATTN		 SELEX
Yin et al.(2017)
TLX3_FL_HT-SELEX 		0.639 0.589
TLX3
M05234_2.00 		Homo sapiens
NAATTGNNNNNNNNNNDCAATTD
HAATTGHNNNNNNNNNNCAATTN		 SELEX
Yin et al.(2017)
TLX3_eDBD_Methyl-HT-SELEX 		0.639 0.589
TLX3
M05236_2.00 		Homo sapiens
HAATTRNNNNNNNNNYHATTV
BAATDRNNNNNNNNNYAATTD		 SELEX
Yin et al.(2017)
TLX3_FL_Methyl-HT-SELEX 		0.639 0.589
MSX2
M00290_2.00 		Homo sapiens
WDATNDNN
NNHNATHW		 PBM
Barrera et al.(2016)
MSX2_REF 		0.630 0.607
Msx2
M00414_2.00 		Mus musculus
HRATKRNN
NNYMATYD		 PBM
Berger et al.(2008)
Msx2_3449 		0.630 0.607
MSX2
M03127_2.00 		Homo sapiens
TAATTRBHWKWTAATTGV
BCAATTAWMWDVYAATTA		 SELEX
Jolma et al.(2013)
MSX2_1 		0.630 0.607
MSX2
M03128_2.00 		Homo sapiens
NTAATTGB
VCAATTAN		 SELEX
Jolma et al.(2013)
MSX2_2 		0.630 0.607
MSX2
M05060_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
MSX2_eDBD_HT-SELEX 		0.630 0.607
MSX2
M10677_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MSX2_Q3 		0.630 0.607
MSX2
M10678_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MSX2_Q6 		0.630 0.607
MSX2
M00288_2.00 		Homo sapiens
NTAATNDN
NHNATTAN		 PBM
Barrera et al.(2016)
MSX2_P148H 		0.630 0.607
MSX2
M05061_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
MSX2_eDBD_Methyl-HT-SELEX_1 		0.630 0.607
MSX2
M05062_2.00 		Homo sapiens
NTAAYGAB
VTCRTTAN		 SELEX
Yin et al.(2017)
MSX2_eDBD_Methyl-HT-SELEX_2 		0.630 0.607
Msx3
M00429_2.00 		Mus musculus
TAATKDNN
NNHMATTA		 PBM
Berger et al.(2008)
Msx3_3206 		0.630 0.589
Msx1
M00501_2.00 		Mus musculus
NHDATND
HNATHDN		 PBM
Berger et al.(2008)
Msx1_3031 		0.630 0.589
Dr
M00555_2.00 		Drosophila melanogaster
TAATTRNN
NNYAATTA		 PBM
Busser et al.(2012a)
Msh 		0.630 0.589
MSX1
M03184_2.00 		Homo sapiens
TAATTRBHHNHTAATTRN
NYAATTADNDDVYAATTA		 SELEX
Jolma et al.(2013)
MSX1_1 		0.630 0.589
MSX1
M03185_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
MSX1_2 		0.630 0.589
MSX1
M03186_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
MSX1_3 		0.630 0.589
Msx3
M03255_2.00 		Mus musculus
TAATTGSHHNNTAATTRN
NYAATTANNDDSCAATTA		 SELEX
Jolma et al.(2013)
Msx3_1 		0.630 0.589
Msx3
M03256_2.00 		Mus musculus
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
Msx3_2 		0.630 0.589
MSX1
M05221_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
MSX1_eDBD_HT-SELEX 		0.630 0.589
MSX1
M05224_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
MSX1_FL_HT-SELEX 		0.630 0.589
Dr
M06482_2.00 		Drosophila melanogaster
TAATTGS
SCAATTA		 B1H
Mathelier et al.(2014)
MA0188.1 		0.630 0.589
Dr
M06229_2.00 		Drosophila melanogaster
TAATTGSHB
VDSCAATTA		 B1H
Zhu et al.(2011)
Dr_Cell_FBgn0000492 		0.630 0.589
Dr
M06230_2.00 		Drosophila melanogaster
TAATTR
YAATTA		 B1H
Zhu et al.(2011)
Dr_SOLEXA_FBgn0000492 		0.630 0.589
MSX1
M10715_2.00 		Homo sapiens
HNBTWWNTG
CANWWAVND		 Transfac
Matys et al.(2006)
V$MSX1_01 		0.630 0.589
MSX1
M10716_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MSX1_Q5_01 		0.630 0.589
MSX1
M10717_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MSX1_Q5 		0.630 0.589
MSX1
M05222_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
MSX1_eDBD_Methyl-HT-SELEX_1 		0.630 0.589
MSX1
M05223_2.00 		Homo sapiens
NTWAYGMB
VKCRTWAN		 SELEX
Yin et al.(2017)
MSX1_eDBD_Methyl-HT-SELEX_2 		0.630 0.589
MSX1
M05225_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
MSX1_FL_Methyl-HT-SELEX_1 		0.630 0.589
MSX1
M05226_2.00 		Homo sapiens
NTWAYGWB
VWCRTWAN		 SELEX
Yin et al.(2017)
MSX1_FL_Methyl-HT-SELEX_2 		0.630 0.589
SPU_026099
M02175_2.00 		Strongylocentrotus purpuratus
KTAATTRB
VYAATTAM		 PBM
Weirauch et al.(2014)
pTH6140 		0.630 0.518
Pdx1
M00446_2.00 		Mus musculus
NWRAYNNN
NNNRTYWN		 PBM
Berger et al.(2008)
Ipf1_3815 		0.630 0.500
PDX1
M03155_2.00 		Homo sapiens
NTAATTRNNNYTAATTRN
NYAATTARNNNYAATTAN		 SELEX
Jolma et al.(2013)
PDX1_1 		0.630 0.500
PDX1
M03156_2.00 		Homo sapiens
BTAATKRN
NYMATTAV		 SELEX
Jolma et al.(2013)
PDX1_2 		0.630 0.500
PDX1
M05161_2.00 		Homo sapiens
YTAATKRB
VYMATTAR		 SELEX
Yin et al.(2017)
PDX1_eDBD_HT-SELEX 		0.630 0.500
PDX1
M09147_2.00 		Homo sapiens
TGATWGATK
MATCWATCA		 Misc
Kulakovskiy et al.(2013)
PDX1_HUMAN.H11MO.0.A 		0.630 0.500
Pdx1
M09192_2.00 		Mus musculus
VYTAATGRB
VYCATTARB		 Misc
Kulakovskiy et al.(2013)
PDX1_MOUSE.H11MO.0.B 		0.630 0.500
Pdx1
M09571_2.00 		Mus musculus
TGATTRATKR
YMATYAATCA		 Misc
Heinz et al.(2010)
Islet-Pdx1_SRA008281 		0.630 0.500
PDX1
M10699_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_01 		0.630 0.500
PDX1
M10700_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_02 		0.630 0.500
PDX1
M10701_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_03 		0.630 0.500
PDX1
M10702_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_04 		0.630 0.500
PDX1
M10703_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_05 		0.630 0.500
PDX1
M10704_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_Q4_01 		0.630 0.500
PDX1
M10705_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_Q4 		0.630 0.500
PDX1
M10706_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_Q5_01 		0.630 0.500
PDX1
M10707_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_Q5 		0.630 0.500
PDX1
M10708_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_Q6 		0.630 0.500
PDX1
M05162_2.00 		Homo sapiens
HTAAYGAB
VTCRTTAD		 SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_1 		0.630 0.500
PDX1
M05163_2.00 		Homo sapiens
YTAATKRB
VYMATTAR		 SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_2 		0.630 0.500
NK7.1
M03847_2.00 		Drosophila melanogaster
VTTAAAYGDTD
HAHCRTTTAAB		 SELEX
Nitta et al.(2015)
NK7.1_1 		0.627 0.607
NK7.1
M03848_2.00 		Drosophila melanogaster
NSTTAATTGVY
RBCAATTAASN		 SELEX
Nitta et al.(2015)
NK7.1_2 		0.627 0.607
NK7.1
M06524_2.00 		Drosophila melanogaster
TTAATDR
YHATTAA		 B1H
Mathelier et al.(2014)
MA0196.1 		0.627 0.607
NK7.1
M06323_2.00 		Drosophila melanogaster
NTTAATDR
YHATTAAN		 B1H
Zhu et al.(2011)
NK7.1_Cell_FBgn0024321 		0.627 0.607
NK7.1
M06324_2.00 		Drosophila melanogaster
YTAATDR
YHATTAR		 B1H
Zhu et al.(2011)
NK7.1_SOLEXA_FBgn0024321 		0.627 0.607
MSX2
M00289_2.00 		Homo sapiens
WDATWDNN
NNHWATHW		 PBM
Barrera et al.(2016)
MSX2_R172H 		0.623 0.589
Scr
M03799_2.00 		Drosophila melanogaster
BTAATKRB
VYMATTAV		 SELEX
Nitta et al.(2015)
Scr_1 		0.622 0.500
Scr
M06496_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Mathelier et al.(2014)
MA0203.1 		0.622 0.500
Scr
M06266_2.00 		Drosophila melanogaster
HVYTAATKA
TMATTARBD		 B1H
Zhu et al.(2011)
Scr_Cell_FBgn0003339 		0.622 0.500
Scr
M06267_2.00 		Drosophila melanogaster
YTAATKR
YMATTAR		 B1H
Zhu et al.(2011)
Scr_SOLEXA_FBgn0003339 		0.622 0.500
Hoxc5
M00422_2.00 		Mus musculus
NWRATND
HNATYWN		 PBM
Berger et al.(2008)
Hoxc5_2630 		0.622 0.482
Hoxa5
M00478_2.00 		Mus musculus
NTAATNDNN
NNHNATTAN		 PBM
Berger et al.(2008)
Hoxa5_3415 		0.622 0.482
Hoxb5
M00480_2.00 		Mus musculus
NWDWTNNNN
NNNNAWHWN		 PBM
Berger et al.(2008)
Hoxb5_3122 		0.622 0.482
HOXB5
M03125_2.00 		Homo sapiens
NNKAATKRNN
NNYMATTMNN		 SELEX
Jolma et al.(2013)
HOXB5_1 		0.622 0.482
Dfd
M03784_2.00 		Drosophila melanogaster
VNTAAYKRBN
NVYMRTTANB		 SELEX
Nitta et al.(2015)
Dfd_1 		0.622 0.482
Dfd
M03785_2.00 		Drosophila melanogaster
VYTAATKAYN
NRTMATTARB		 SELEX
Nitta et al.(2015)
Dfd_2 		0.622 0.482
HOXA5
M04968_2.00 		Homo sapiens
STAATKRS
SYMATTAS		 SELEX
Yin et al.(2017)
HOXA5_eDBD_HT-SELEX 		0.622 0.482
HOXA5
M04971_2.00 		Homo sapiens
NTMATKRB
VYMATKAN		 SELEX
Yin et al.(2017)
HOXA5_FL_HT-SELEX 		0.622 0.482
HOXB5
M05051_2.00 		Homo sapiens
NTAATKRV
BYMATTAN		 SELEX
Yin et al.(2017)
HOXB5_eDBD_HT-SELEX 		0.622 0.482
HOXB5
M05054_2.00 		Homo sapiens
STMATKAB
VTMATKAS		 SELEX
Yin et al.(2017)
HOXB5_FL_HT-SELEX 		0.622 0.482
Dfd
M06481_2.00 		Drosophila melanogaster
YTAATGA
TCATTAR		 B1H
Mathelier et al.(2014)
MA0186.1 		0.622 0.482
Dfd
M06226_2.00 		Drosophila melanogaster
VYTAATGA
TCATTAAB		 B1H
Zhu et al.(2011)
Dfd_Cell_FBgn0000439 		0.622 0.482
Dfd
M06227_2.00 		Drosophila melanogaster
TTAATKRY
RYMATTAA		 B1H
Zhu et al.(2011)
Dfd_FlyReg_FBgn0000439 		0.622 0.482
Dfd
M06228_2.00 		Drosophila melanogaster
NBTAATKR
YMATTAVN		 B1H
Zhu et al.(2011)
Dfd_SOLEXA_FBgn0000439 		0.622 0.482
Dfd
M09675_2.00 		Drosophila melanogaster
TTAATKRB
VYMATTAA		 Misc
Kulakovskiy et al.(2009)
Dfd 		0.622 0.482
Dfd
M10784_2.00 		Drosophila melanogaster
NNNNRKTAATNNNNNN
NNNNNNATTAMYNNNN		 Transfac
Matys et al.(2006)
I$DFD_01 		0.622 0.482
HOXA5
M10652_2.00 		Homo sapiens
NGRDBKBDHNBAVTAATKRRGRDVDDDGSR
YSCHHHBHYCYYMATTABTVNDHVMVHYCN		 Transfac
Matys et al.(2006)
V$HOX13_01 		0.622 0.482
HOXA5
M08457_2.00 		Homo sapiens
CDBWAATK
MATTWVHG		 COMPILED
Mathelier et al.(2014)
MA0158.1 		0.622 0.482
HOXA5
M04969_2.00 		Homo sapiens
BTAATKRV
BYMATTAV		 SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_1 		0.622 0.482
HOXA5
M04970_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_2 		0.622 0.482
HOXA5
M04972_2.00 		Homo sapiens
NTMATKRN
NYMATKAN		 SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_1 		0.622 0.482
HOXA5
M04973_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_2 		0.622 0.482
HOXB5
M05052_2.00 		Homo sapiens
NTMATKRN
NYMATKAN		 SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_1 		0.622 0.482
HOXB5
M05053_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_2 		0.622 0.482
HOXB5
M05055_2.00 		Homo sapiens
NTMATKAB
VTMATKAN		 SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_1 		0.622 0.482
HOXB5
M05056_2.00 		Homo sapiens
HTAAYGAY
RTCRTTAD		 SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_2 		0.622 0.482
MEOX2
M03103_2.00 		Homo sapiens
NNTRATKASN
NSTMATYANN		 SELEX
Jolma et al.(2013)
MEOX2_1 		0.618 0.500
MEOX2
M03104_2.00 		Homo sapiens
NTAATTANVNTAATTAV
BTAATTANBNTAATTAN		 SELEX
Jolma et al.(2013)
MEOX2_2 		0.618 0.500
MEOX2
M03105_2.00 		Homo sapiens
HTAATGATGATKAN
NTMATCATCATTAD		 SELEX
Jolma et al.(2013)
MEOX2_3 		0.618 0.500
Meox2
M03271_2.00 		Mus musculus
NTAATKAN
NTMATTAN		 SELEX
Jolma et al.(2013)
Meox2_1 		0.618 0.500
MEOX2
M04988_2.00 		Homo sapiens
NTDAYGHB
VDCRTHAN		 SELEX
Yin et al.(2017)
MEOX2_FL_HT-SELEX_1 		0.618 0.500
MEOX2
M04989_2.00 		Homo sapiens
NTVATBRV
BYVATBAN		 SELEX
Yin et al.(2017)
MEOX2_FL_HT-SELEX_2 		0.618 0.500
Meox2
M10771_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEOX2_05 		0.618 0.500
MEOX2
M04990_2.00 		Homo sapiens
NTAAYGHB
VDCRTTAN		 SELEX
Yin et al.(2017)
MEOX2_FL_Methyl-HT-SELEX_1 		0.618 0.500
MEOX2
M04991_2.00 		Homo sapiens
NTVATKRN
NYMATBAN		 SELEX
Yin et al.(2017)
MEOX2_FL_Methyl-HT-SELEX_2 		0.618 0.500
Meox1
M00384_2.00 		Mus musculus
NTRATKRNN
NNYMATYAN		 PBM
Berger et al.(2008)
Meox1_2310 		0.618 0.482
MEOX1
M03077_2.00 		Homo sapiens
NNTAATTASN
NSTAATTANN		 SELEX
Jolma et al.(2013)
MEOX1_1 		0.618 0.482
MEOX1
M04901_2.00 		Homo sapiens
NTDAYGHB
VDCRTHAN		 SELEX
Yin et al.(2017)
MEOX1_FL_HT-SELEX_1 		0.618 0.482
MEOX1
M04902_2.00 		Homo sapiens
NTMATKRN
NYMATKAN		 SELEX
Yin et al.(2017)
MEOX1_FL_HT-SELEX_2 		0.618 0.482
MEOX1
M04903_2.00 		Homo sapiens
NTAAYGWB
VWCRTTAN		 SELEX
Yin et al.(2017)
MEOX1_FL_Methyl-HT-SELEX_1 		0.618 0.482
MEOX1
M04904_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
MEOX1_FL_Methyl-HT-SELEX_2 		0.618 0.482
Emx2
M00495_2.00 		Mus musculus
NTAATDDNN
NNHHATTAN		 PBM
Berger et al.(2008)
Emx2_3420 		0.618 0.571
EMX2
M03210_2.00 		Homo sapiens
NBTAATTANN
NNTAATTAVN		 SELEX
Jolma et al.(2013)
EMX2_1 		0.618 0.571
EMX2
M03211_2.00 		Homo sapiens
YMATTARBTAATKR
YMATTAVYTAATKR		 SELEX
Jolma et al.(2013)
EMX2_2 		0.618 0.571
EMX2
M05281_2.00 		Homo sapiens
YTAATKAB
VTMATTAR		 SELEX
Yin et al.(2017)
EMX2_eDBD_HT-SELEX 		0.618 0.571
EMX2
M05282_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Yin et al.(2017)
EMX2_eDBD_Methyl-HT-SELEX 		0.618 0.571
EMX1
M02088_2.00 		Homo sapiens
NNTAATKANN
NNTMATTANN		 PBM
Weirauch et al.(2014)
pTH5677 		0.618 0.554
EMX1
M03151_2.00 		Homo sapiens
NBTAATTRNN
NNYAATTAVN		 SELEX
Jolma et al.(2013)
EMX1_1 		0.618 0.554
EMX1
M03152_2.00 		Homo sapiens
YMATTARYTAATKR
YMATTARYTAATKR		 SELEX
Jolma et al.(2013)
EMX1_2 		0.618 0.554
EMX1
M05145_2.00 		Homo sapiens
BTAATTAN
NTAATTAV		 SELEX
Yin et al.(2017)
EMX1_eDBD_HT-SELEX 		0.618 0.554
EMX1
M05147_2.00 		Homo sapiens
BTAATTAV
BTAATTAV		 SELEX
Yin et al.(2017)
EMX1_FL_HT-SELEX 		0.618 0.554
EMX1
M05146_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
EMX1_eDBD_Methyl-HT-SELEX 		0.618 0.554
EMX1
M05148_2.00 		Homo sapiens
BTAATTAN
NTAATTAV		 SELEX
Yin et al.(2017)
EMX1_FL_Methyl-HT-SELEX 		0.618 0.554
Mnx1
M00388_2.00 		Mus musculus
NTAATBDNNN
NNNHVATTAN		 PBM
Berger et al.(2008)
Hlxb9_3422 		0.616 0.554
MNX1
M03143_2.00 		Homo sapiens
NHTAATTRNH
DNYAATTADN		 SELEX
Jolma et al.(2013)
MNX1_1 		0.616 0.554
unpg
M03836_2.00 		Drosophila melanogaster
SSTAATYRVN
NBYRATTASS		 SELEX
Nitta et al.(2015)
unpg_1 		0.616 0.554
MNX1
M05126_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
MNX1_eDBD_HT-SELEX 		0.616 0.554
unpg
M06517_2.00 		Drosophila melanogaster
BTAATTR
YAATTAV		 B1H
Mathelier et al.(2014)
MA0251.1 		0.616 0.554
unpg
M06311_2.00 		Drosophila melanogaster
NBTAATTR
YAATTAVN		 B1H
Zhu et al.(2011)
Unpg_Cell_FBgn0015561 		0.616 0.554
unpg
M06312_2.00 		Drosophila melanogaster
HTAATTR
YAATTAD		 B1H
Zhu et al.(2011)
Unpg_SOLEXA_FBgn0015561 		0.616 0.554
MNX1
M05127_2.00 		Homo sapiens
HTAAYGHB
VDCRTTAD		 SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_1 		0.616 0.554
MNX1
M05128_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_2 		0.616 0.554
VENTX
M02091_2.00 		Homo sapiens
TTAATTAB
VTAATTAA		 PBM
Weirauch et al.(2014)
pTH5490 		0.613 0.482
VENTX
M00305_2.00 		Homo sapiens
DTAATTRR
YYAATTAH		 PBM
Barrera et al.(2016)
VENTX_REF 		0.613 0.482
VENTX
M03169_2.00 		Homo sapiens
YTAATBGNT
ANCVATTAR		 SELEX
Jolma et al.(2013)
VENTX_1 		0.613 0.482
VENTX
M03170_2.00 		Homo sapiens
VSYTAATSGRWAAMCGATTAG
CTAATCGKTTWYCSATTARSB		 SELEX
Jolma et al.(2013)
VENTX_2 		0.613 0.482
VENTX
M05188_2.00 		Homo sapiens
CGHTAATBG
CVATTADCG		 SELEX
Yin et al.(2017)
VENTX_FL_HT-SELEX_1 		0.613 0.482
VENTX
M05189_2.00 		Homo sapiens
VNTAATBRNN
NNYVATTANB		 SELEX
Yin et al.(2017)
VENTX_FL_HT-SELEX_2 		0.613 0.482
VENTX
M00303_2.00 		Homo sapiens
NVTAATTANNN
NNNTAATTABN		 PBM
Barrera et al.(2016)
VENTX_E101K 		0.613 0.482
VENTX
M05190_2.00 		Homo sapiens
VHTAATKRNN
NNYMATTADB		 SELEX
Yin et al.(2017)
VENTX_FL_Methyl-HT-SELEX 		0.613 0.482
VENTX
M00304_2.00 		Homo sapiens
NATAYATAB
VTATRTATN		 PBM
Barrera et al.(2016)
VENTX_R143C 		0.613 0.464
Q0N4M8_NEMVE
M02166_2.00 		Nematostella vectensis
HTAATKAC
GTMATTAD		 PBM
Weirauch et al.(2014)
pTH6215 		0.611 0.482
repo
M03826_2.00 		Drosophila melanogaster
VTTAATTARB
VYTAATTAAB		 SELEX
Nitta et al.(2015)
repo_1 		0.607 0.446
repo
M03827_2.00 		Drosophila melanogaster
VKYAATTRRN
NYYAATTRMB		 SELEX
Nitta et al.(2015)
repo_2 		0.607 0.446
repo
M03828_2.00 		Drosophila melanogaster
VBYAATTRVNNBYAATTRVB
VBYAATTRVNNBYAATTRVB		 SELEX
Nitta et al.(2015)
repo_3 		0.607 0.446
repo
M06511_2.00 		Drosophila melanogaster
TTAATTA
TAATTAA		 B1H
Mathelier et al.(2014)
MA0240.1 		0.607 0.446
repo
M06301_2.00 		Drosophila melanogaster
DTTAATTA
TAATTAAH		 B1H
Zhu et al.(2011)
Repo_Cell_FBgn0011701 		0.607 0.446
repo
M06302_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Zhu et al.(2011)
Repo_SOLEXA_FBgn0011701 		0.607 0.446
ems
M02114_2.00 		Drosophila melanogaster
NTAATKRNB
VNYMATTAN		 PBM
Weirauch et al.(2014)
pTH5673 		0.606 0.536
E5
M03814_2.00 		Drosophila melanogaster
STAATKNN
NNMATTAS		 SELEX
Nitta et al.(2015)
E5_1 		0.606 0.536
ems
M03789_2.00 		Drosophila melanogaster
BTAATTAN
NTAATTAV		 SELEX
Nitta et al.(2015)
ems_1 		0.606 0.536
ems
M03790_2.00 		Drosophila melanogaster
BTAATTAVBVBTAATKRN
NYMATTAVBVBTAATTAV		 SELEX
Nitta et al.(2015)
ems_2 		0.606 0.536
ems
M03791_2.00 		Drosophila melanogaster
BTAATKRN
NYMATTAV		 SELEX
Nitta et al.(2015)
ems_3 		0.606 0.536
ems
M03792_2.00 		Drosophila melanogaster
STAATKRSSSSTAATKRV
BYMATTASSSSYMATTAS		 SELEX
Nitta et al.(2015)
ems_4 		0.606 0.536
ems
M06484_2.00 		Drosophila melanogaster
HTAATKR
YMATTAD		 B1H
Mathelier et al.(2014)
MA0219.1 		0.606 0.536
E5
M06507_2.00 		Drosophila melanogaster
BTAATKA
TMATTAV		 B1H
Mathelier et al.(2014)
MA0189.1 		0.606 0.536
E5
M06293_2.00 		Drosophila melanogaster
NBTAATKA
TMATTAVN		 B1H
Zhu et al.(2011)
E5_Cell_FBgn0008646 		0.606 0.536
E5
M06294_2.00 		Drosophila melanogaster
NTAATDR
YHATTAN		 B1H
Zhu et al.(2011)
E5_SOLEXA_FBgn0008646 		0.606 0.536
ems
M06233_2.00 		Drosophila melanogaster
WHTAATKR
YMATTADW		 B1H
Zhu et al.(2011)
Ems_Cell_FBgn0000576 		0.606 0.536
ems
M06234_2.00 		Drosophila melanogaster
TSTMATHM
KDATKASA		 B1H
Zhu et al.(2011)
ems_FlyReg_FBgn0000576 		0.606 0.536
ems
M06235_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Zhu et al.(2011)
Ems_SOLEXA_FBgn0000576 		0.606 0.536
ems
M09676_2.00 		Drosophila melanogaster
WTWATGA
TCATWAW		 Misc
Kulakovskiy et al.(2009)
ems 		0.606 0.536
Gbx2
M00462_2.00 		Mus musculus
NNDAHNN
NNDTHNN		 PBM
Berger et al.(2008)
Gbx2_3110 		0.604 0.536
Gbx1
M00525_2.00 		Mus musculus
NNTAATNR
YNATTANN		 PBM
Berger et al.(2008)
Gbx1_2883 		0.604 0.536
GBX1
M03193_2.00 		Homo sapiens
NBTAATTRSB
VSYAATTAVN		 SELEX
Jolma et al.(2013)
GBX1_1 		0.604 0.536
GBX2
M03201_2.00 		Homo sapiens
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
GBX2_1 		0.604 0.536
GBX2
M03202_2.00 		Homo sapiens
TAATTRVBCAATWA
TWATTGVBYAATTA		 SELEX
Jolma et al.(2013)
GBX2_2 		0.604 0.536
GBX2
M03203_2.00 		Homo sapiens
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
GBX2_3 		0.604 0.536
Gbx1
M03286_2.00 		Mus musculus
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
Gbx1_1 		0.604 0.536
Gbx2
M03268_2.00 		Mus musculus
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
Gbx2_1 		0.604 0.536
GBX2
M05265_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
GBX2_eDBD_HT-SELEX 		0.604 0.536
GBX2
M05268_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
GBX2_FL_HT-SELEX 		0.604 0.536
GBX2
M05266_2.00 		Homo sapiens
HTAAYGAB
VTCRTTAD		 SELEX
Yin et al.(2017)
GBX2_eDBD_Methyl-HT-SELEX_1 		0.604 0.536
GBX2
M05267_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
GBX2_eDBD_Methyl-HT-SELEX_2 		0.604 0.536
GBX2
M05269_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
GBX2_FL_Methyl-HT-SELEX_1 		0.604 0.536
GBX2
M05270_2.00 		Homo sapiens
NTAAYGAB
VTCRTTAN		 SELEX
Yin et al.(2017)
GBX2_FL_Methyl-HT-SELEX_2 		0.604 0.536
exex
M03871_2.00 		Drosophila melanogaster
NNNNYAATTNNYDN
NHRNNAATTRNNNN		 SELEX
Nitta et al.(2015)
exex_1 		0.604 0.518
exex
M06544_2.00 		Drosophila melanogaster
BTAATTA
TAATTAV		 B1H
Mathelier et al.(2014)
MA0224.1 		0.604 0.518
exex
M06364_2.00 		Drosophila melanogaster
TAATTAV
BTAATTA		 B1H
Zhu et al.(2011)
Exex_Cell_FBgn0041156 		0.604 0.518
exex
M06365_2.00 		Drosophila melanogaster
TAATBR
YVATTA		 B1H
Zhu et al.(2011)
Exex_SOLEXA_FBgn0041156 		0.604 0.518
Nkx1-1
M00442_2.00 		Mus musculus
NNTAATNDNN
NNHNATTANN		 PBM
Berger et al.(2008)
Nkx1-1_3856 		0.603 0.589
Nkx1-2
M00503_2.00 		Mus musculus
NNTAAWNDN
NHNWTTANN		 PBM
Berger et al.(2008)
Nkx1-2_3214 		0.603 0.589
slou
M00557_2.00 		Drosophila melanogaster
NNTAATDRN
NYHATTANN		 PBM
Busser et al.(2012a)
Slou 		0.603 0.589
slou
M03798_2.00 		Drosophila melanogaster
VBTAATTRSB
VSYAATTAVB		 SELEX
Nitta et al.(2015)
slou_1 		0.603 0.589
slou
M06494_2.00 		Drosophila melanogaster
YTAATKR
YMATTAR		 B1H
Mathelier et al.(2014)
MA0245.1 		0.603 0.589
slou
M06262_2.00 		Drosophila melanogaster
BYTAATKR
YMATTARV		 B1H
Zhu et al.(2011)
Slou_Cell_FBgn0002941 		0.603 0.589
slou
M06263_2.00 		Drosophila melanogaster
HTAATKR
YMATTAD		 B1H
Zhu et al.(2011)
Slou_SOLEXA_FBgn0002941 		0.603 0.589
Bsx
M00516_2.00 		Mus musculus
NTAAYBDNN
NNHVRTTAN		 PBM
Berger et al.(2008)
Bsx_3483 		0.603 0.589
BSX
M03235_2.00 		Homo sapiens
NTAATBRN
NYVATTAN		 SELEX
Jolma et al.(2013)
BSX_1 		0.603 0.589
BSX
M05377_2.00 		Homo sapiens
NTAAYGHB
VDCRTTAN		 SELEX
Yin et al.(2017)
BSX_eDBD_HT-SELEX_1 		0.603 0.589
BSX
M05378_2.00 		Homo sapiens
BTAATBRV
BYVATTAV		 SELEX
Yin et al.(2017)
BSX_eDBD_HT-SELEX_2 		0.603 0.589
BSX
M05379_2.00 		Homo sapiens
NTAAYGHB
VDCRTTAN		 SELEX
Yin et al.(2017)
BSX_eDBD_Methyl-HT-SELEX_1 		0.603 0.589
BSX
M05380_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
BSX_eDBD_Methyl-HT-SELEX_2 		0.603 0.589
bsh
M02113_2.00 		Drosophila melanogaster
NNTAAYBDNN
NNHVRTTANN		 PBM
Weirauch et al.(2014)
pTH6569 		0.603 0.571
bsh
M03786_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
bsh_1 		0.603 0.571
bsh
M03787_2.00 		Drosophila melanogaster
TAATTRVWTAATKR
YMATTAWBYAATTA		 SELEX
Nitta et al.(2015)
bsh_2 		0.603 0.571
bsh
M03788_2.00 		Drosophila melanogaster
NTAATBRN
NYVATTAN		 SELEX
Nitta et al.(2015)
bsh_3 		0.603 0.571
bsh
M06483_2.00 		Drosophila melanogaster
YTAATBR
YVATTAR		 B1H
Mathelier et al.(2014)
MA0214.1 		0.603 0.571
bsh
M06231_2.00 		Drosophila melanogaster
HYTAATBRV
BYVATTARD		 B1H
Zhu et al.(2011)
Bsh_Cell_FBgn0000529 		0.603 0.571
bsh
M06232_2.00 		Drosophila melanogaster
NTAATKR
YMATTAN		 B1H
Zhu et al.(2011)
Bsh_SOLEXA_FBgn0000529 		0.603 0.571
btn
M03832_2.00 		Drosophila melanogaster
NNTAATKANB
VNTMATTANN		 SELEX
Nitta et al.(2015)
btn_1 		0.602 0.518
btn
M03833_2.00 		Drosophila melanogaster
VNTAATKABN
NVTMATTANB		 SELEX
Nitta et al.(2015)
btn_2 		0.602 0.518
btn
M06515_2.00 		Drosophila melanogaster
DTAATKA
TMATTAH		 B1H
Mathelier et al.(2014)
MA0215.1 		0.602 0.518
btn
M06307_2.00 		Drosophila melanogaster
NDTAATKA
TMATTAHN		 B1H
Zhu et al.(2011)
Btn_Cell_FBgn0014949 		0.602 0.518
btn
M06308_2.00 		Drosophila melanogaster
HTAATKA
TMATTAD		 B1H
Zhu et al.(2011)
Btn_SOLEXA_FBgn0014949 		0.602 0.518
Hoxd3
M00531_2.00 		Mus musculus
NTAATNDN
NHNATTAN		 PBM
Berger et al.(2008)
Hoxd3_1742 		0.602 0.464
Hoxa3
M00172_2.00 		Mus musculus
NTAATKRNNN
NNNYMATTAN		 PBM
Badis et al.(2009)
Hoxa3_2783 		0.602 0.464
Hoxa3
M00532_2.00 		Mus musculus
NTAATKRNN
NNYMATTAN		 PBM
Berger et al.(2008)
Hoxa3_2783 		0.602 0.464
Hoxd3
M03287_2.00 		Mus musculus
NNTAATKRNN
NNYMATTANN		 SELEX
Jolma et al.(2013)
Hoxd3_1 		0.602 0.464
HOXD3
M05101_2.00 		Homo sapiens
CTAATTAS
STAATTAG		 SELEX
Yin et al.(2017)
HOXD3_FL_HT-SELEX 		0.602 0.464
HOXA3
M10651_2.00 		Homo sapiens
SVTWNDDKB
VMHHNWABS		 Transfac
Matys et al.(2006)
V$HOXA3_01 		0.602 0.464
HOXD3
M05102_2.00 		Homo sapiens
YTAAYGAY
RTCRTTAR		 SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_1 		0.602 0.464
HOXD3
M05103_2.00 		Homo sapiens
CTAATKAC
GTMATTAG		 SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_2 		0.602 0.464
Hoxb3
M00504_2.00 		Mus musculus
NTAATKRNN
NNYMATTAN		 PBM
Berger et al.(2008)
Hoxb3_1720 		0.602 0.446
HOXB3
M03126_2.00 		Homo sapiens
NBTAATKRNN
NNYMATTAVN		 SELEX
Jolma et al.(2013)
HOXB3_1 		0.602 0.446
Barhl1
M00433_2.00 		Mus musculus
NTAAWNRNN
NNYNWTTAN		 PBM
Berger et al.(2008)
Barhl1_2590 		0.600 0.571
Barhl1
M03258_2.00 		Mus musculus
NNTAAWYGNH
DNCRWTTANN		 SELEX
Jolma et al.(2013)
Barhl1_1 		0.600 0.571
Barhl1
M03259_2.00 		Mus musculus
NNTAADNRNN
NNYNHTTANN		 SELEX
Jolma et al.(2013)
Barhl1_2 		0.600 0.571
Barhl1
M03260_2.00 		Mus musculus
TAAWYGNYNNTAAWYG
CRWTTANNRNCRWTTA		 SELEX
Jolma et al.(2013)
Barhl1_3 		0.600 0.571
BARHL1
M05091_2.00 		Homo sapiens
NTAAWYGN
NCRWTTAN		 SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_1 		0.600 0.571
BARHL1
M05092_2.00 		Homo sapiens
NTAADBGN
NCVHTTAN		 SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_2 		0.600 0.571
BARHL1
M05093_2.00 		Homo sapiens
NTAADKGN
NCMHTTAN		 SELEX
Yin et al.(2017)
BARHL1_eDBD_Methyl-HT-SELEX 		0.600 0.571
CG18599
M06539_2.00 		Drosophila melanogaster
HTAATKA
TMATTAD		 B1H
Mathelier et al.(2014)
MA0177.1 		0.600 0.482
CG18599
M06354_2.00 		Drosophila melanogaster
HTAATKA
TMATTAD		 B1H
Zhu et al.(2011)
CG18599_Cell_FBgn0038592 		0.600 0.482
CG18599
M06355_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Zhu et al.(2011)
CG18599_SOLEXA_FBgn0038592 		0.600 0.482
NEMVEDRAFT_v1g8907
M02154_2.00 		Nematostella vectensis
NTAATDRNNN
NNNYHATTAN		 PBM
Weirauch et al.(2014)
pTH6483 		0.599 0.536
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00537_2.00 Homeodomain 1 56

DNA Binding Domains

Protein ID Domain From To Sequence
Hmx3_CONSTRUCT Homeodomain 1 56

Links

Other Homeodomain family TFs
Other PBM CONSTRUCTS TFs

3356 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIBMGA010810 Bombyx mori BGIBMGA010810 I 0.853
CapteG80758 Capitella teleta CapteG80758 I 0.853
HMX3 Bos taurus ENSBTAG00000001006 I 0.853
HMX3 Canis familiaris ENSCAFG00000012698 I 0.853
HMX3 Callithrix jacchus ENSCJAG00000001087 I 0.853
HMX3 Cavia porcellus ENSCPOG00000011950 I 0.853
ENSCSAG00000004552 Chlorocebus sabaeus ENSCSAG00000004552 I 0.853
hmx3a Danio rerio ENSDARG00000070955 I 0.853
hmx1 Danio rerio ENSDARG00000095651 I 0.853
HMX3 Dasypus novemcinctus ENSDNOG00000017924 I 0.853
HMX3 Erinaceus europaeus ENSEEUG00000004004 I 0.853
ENSFALG00000015270 Ficedula albicollis ENSFALG00000015270 I 0.853
ENSFCAG00000003422 Felis catus ENSFCAG00000003422 I 0.853
HMX3 Homo sapiens ENSG00000188620 D 0.853
hmx3a Gasterosteus aculeatus ENSGACG00000009716 I 0.853
HMX3 Gallus gallus ENSGALG00000023415 I 0.853
HMX3 Gorilla gorilla ENSGGOG00000023271 I 0.853
ENSGMOG00000018359 Gadus morhua ENSGMOG00000018359 I 0.853
ENSLACG00000011659 Latimeria chalumnae ENSLACG00000011659 I 0.853
HMX3 Loxodonta africana ENSLAFG00000021892 I 0.853
ENSLOCG00000008201 Lepisosteus oculatus ENSLOCG00000008201 I 0.853
ENSLOCG00000010357 Lepisosteus oculatus ENSLOCG00000010357 I 0.853
ENSMEUG00000000448 Macropus eugenii ENSMEUG00000000448 I 0.853
ENSMGAG00000011613 Meleagris gallopavo ENSMGAG00000011613 I 0.853
HMX3 Microcebus murinus ENSMICG00000000467 I 0.853
HMX3 Macaca mulatta ENSMMUG00000003090 I 0.853
HMX3 Monodelphis domestica ENSMODG00000007552 I 0.853
ENSMPUG00000002780 Mustela putorius furo ENSMPUG00000002780 I 0.853
Hmx3 Mus musculus ENSMUSG00000040148 I 0.853
HMX3 Otolemur garnettii ENSOGAG00000033826 I 0.853
ENSONIG00000000532 Oreochromis niloticus ENSONIG00000000532 I 0.853
HMX3 Ochotona princeps ENSOPRG00000014239 I 0.853
hmx3a Oryzias latipes ENSORLG00000005578 I 0.853
ENSPANG00000020349 Papio anubis ENSPANG00000020349 I 0.853
ENSPFOG00000017915 Poecilia formosa ENSPFOG00000017915 I 0.853
ENSPMAG00000002535 Petromyzon marinus ENSPMAG00000002535 I 0.853
ENSPPYG00000002729 Pongo abelii ENSPPYG00000002729 I 0.853
ENSPSIG00000008269 Pelodiscus sinensis ENSPSIG00000008269 I 0.853
ENSPSIG00000014657 Pelodiscus sinensis ENSPSIG00000014657 I 0.853
HMX3 Pteropus vampyrus ENSPVAG00000015584 I 0.853
Hmx3 Rattus norvegicus ENSRNOG00000020637 I 0.853
HMX3 Sus scrofa ENSSSCG00000010724 I 0.853
ENSSTOG00000003981 Ictidomys tridecemlineatus ENSSTOG00000003981 I 0.853
hmx3a Takifugu rubripes ENSTRUG00000001117 I 0.853
HMX3 Tursiops truncatus ENSTTRG00000016192 I 0.853
ENSXMAG00000018314 Xiphophorus maculatus ENSXMAG00000018314 I 0.853
HMEL013133 Heliconius melpomene HMEL013133 I 0.853
KGM_06763 Danaus plexippus KGM_06763 I 0.853
LotgiG70599 Lottia gigantea LotgiG70599 I 0.853
PHUM433410 Pediculus humanus PHUM433410 I 0.853
SMAR005626 Strigamia maritima SMAR005626 I 0.853
TC012136 Tribolium castaneum TC012136 I 0.853
YQE_12822 Dendroctonus ponderosae YQE_12822 I 0.853
Alligator_sinensis_CCG009968.1 Alligator sinensis Alligator_sinensis_CCG009968.1 I 0.853
Cmyd_10008157 Chelonia mydas Cmyd_10008157 I 0.853
e_gw.406.46.1 Branchiostoma floridae e_gw.406.46.1 I 0.853
Sakowv30016219m.g Saccoglossus kowalevskii Sakowv30016219m.g I 0.853
AAI55954 Xenopus laevis AAI55954 I 0.853
CLEC002970 Cimex lectularius CLEC002970 I 0.853
HHAL009706-PA Halyomorpha halys HHAL009706-PA I 0.853
HHAL011263-PA Halyomorpha halys HHAL011263-PA I 0.853
LDEC011519 Leptinotarsa decemlineata LDEC011519 I 0.853
hmx3 Xenopus tropicalis XB-GENE-483776 I 0.853
hmx1 Xenopus tropicalis XB-GENE-6259139 I 0.853
hmx3.L Xenopus laevis XB-GENE-865014 I 0.853
Pvit_17598 Pogona vitticeps Pvit_17598 I 0.852
CpipJ_CPIJ009678 Culex pipiens CpipJ_CPIJ009678 I 0.851
AAEL014125 Aedes aegypti AAEL014125 I 0.851
ACEP24969 Atta cephalotes ACEP24969 I 0.851
CGI_10027035 Crassostrea gigas CGI_10027035 I 0.851
CPIJ009678 Culex quinquefasciatus CPIJ009678 I 0.851
ENSORLG00000006060 Oryzias latipes ENSORLG00000006060 I 0.851
GL13779 Drosophila persimilis FBgn0151384 I 0.851
GK18982 Drosophila willistoni FBgn0220980 I 0.851
GA30058 Drosophila pseudoobscura FBgn0261663 I 0.851
SINV10193 Solenopsis invicta SINV10193 I 0.851
LCUP006693 Lucilia cuprina LCUP006693 I 0.851
PTRK_0000466100 Parastrongyloides trichosuri PTRK_0000466100 I 0.850
SPAL_0000384300 Strongyloides papillosus SPAL_0000384300 I 0.850
SVE_0784200 Strongyloides venezuelensis SVE_0784200 I 0.850
ACYPI56493 Acyrthosiphon pisum ACYPI56493 I 0.849
HMX3 Anolis carolinensis ENSACAG00000017490 I 0.849
ENSACAG00000027376 Anolis carolinensis ENSACAG00000027376 I 0.849
ENSACAG00000027749 Anolis carolinensis ENSACAG00000027749 I 0.849
ENSAMXG00000019213 Astyanax mexicanus ENSAMXG00000019213 I 0.849
hmx3b Danio rerio ENSDARG00000096716 I 0.849
ENSFALG00000009706 Ficedula albicollis ENSFALG00000009706 I 0.849
HMX3 Gasterosteus aculeatus ENSGACG00000002521 I 0.849
ENSGALG00000015600 Gallus gallus ENSGALG00000015600 I 0.849
ENSGMOG00000019034 Gadus morhua ENSGMOG00000019034 I 0.849
ENSONIG00000003525 Oreochromis niloticus ENSONIG00000003525 I 0.849
ENSONIG00000016033 Oreochromis niloticus ENSONIG00000016033 I 0.849
HMX3 Oryzias latipes ENSORLG00000009549 I 0.849
ENSPFOG00000011482 Poecilia formosa ENSPFOG00000011482 I 0.849
ENSPFOG00000014595 Poecilia formosa ENSPFOG00000014595 I 0.849
ENSTNIG00000002168 Tetraodon nigroviridis ENSTNIG00000002168 I 0.849
HMX3 Takifugu rubripes ENSTRUG00000010564 I 0.849
ENSXMAG00000016635 Xiphophorus maculatus ENSXMAG00000016635 I 0.849
HelroG83996 Helobdella robusta HelroG83996 I 0.849
tetur22g01850 Tetranychus urticae tetur22g01850 I 0.849
Ogr10724 Ophisaurus gracilis Ogr10724 I 0.849
ADAC003895 Anopheles darlingi ADAC003895 I 0.847
AGAP000488 Anopheles gambiae AGAP000488 I 0.847
EFV58496 Trichinella spiralis EFV58496 I 0.847
HMX1 Canis familiaris ENSCAFG00000014598 I 0.847
HMX1 Callithrix jacchus ENSCJAG00000033163 I 0.847
HMX1 Cavia porcellus ENSCPOG00000022976 I 0.847
ENSCSAG00000015947 Chlorocebus sabaeus ENSCSAG00000015947 I 0.847
HMX1 Homo sapiens ENSG00000215612 D 0.847
ENSGACG00000019416 Gasterosteus aculeatus ENSGACG00000019416 I 0.847
HMX1 Gorilla gorilla ENSGGOG00000008275 I 0.847
ENSGMOG00000020608 Gadus morhua ENSGMOG00000020608 I 0.847
ENSMEUG00000012811 Macropus eugenii ENSMEUG00000012811 I 0.847
HMX1 Macaca mulatta ENSMMUG00000013590 I 0.847
ENSMODG00000003283 Monodelphis domestica ENSMODG00000003283 I 0.847
ENSMPUG00000010565 Mustela putorius furo ENSMPUG00000010565 I 0.847
Hmx1 Mus musculus ENSMUSG00000067438 D 0.847
HMX1 Otolemur garnettii ENSOGAG00000032103 I 0.847
ENSONIG00000001816 Oreochromis niloticus ENSONIG00000001816 I 0.847
ENSPANG00000022910 Papio anubis ENSPANG00000022910 I 0.847
ENSPCAG00000004179 Procavia capensis ENSPCAG00000004179 I 0.847
ENSPFOG00000024724 Poecilia formosa ENSPFOG00000024724 I 0.847
ENSPPYG00000015293 Pongo abelii ENSPPYG00000015293 I 0.847
Hmx1 Rattus norvegicus ENSRNOG00000009154 I 0.847
ENSSHAG00000009037 Sarcophilus harrisii ENSSHAG00000009037 I 0.847
ENSTNIG00000010150 Tetraodon nigroviridis ENSTNIG00000010150 I 0.847
GI24795 Drosophila mojavensis FBgn0147517 I 0.847
GM15242 Drosophila sechellia FBgn0170162 I 0.847
GJ24443 Drosophila virilis FBgn0211523 I 0.847
GE25478 Drosophila yakuba FBgn0242546 I 0.847
Hmx Drosophila melanogaster FBgn0264005 D 0.847
HelroG148410 Helobdella robusta HelroG148410 I 0.847
MESCA009437 Megaselia scalaris MESCA009437 I 0.847
NV12622 Nasonia vitripennis NV12622 I 0.847
AARA000393 Anopheles arabiensis AARA000393 I 0.847
AATE013991 Anopheles atroparvus AATE013991 I 0.847
ADIR001369 Anopheles dirus ADIR001369 I 0.847
AEPI009369 Anopheles epiroticus AEPI009369 I 0.847
AFUN008162 Anopheles funestus AFUN008162 I 0.847
AMEC006375 Anopheles melas AMEC006375 I 0.847
AMEM016182 Anopheles merus AMEM016182 I 0.847
AMIN005229 Anopheles minimus AMIN005229 I 0.847
AQUA008034 Anopheles quadriannulatus AQUA008034 I 0.847
ASIS007202 Anopheles sinensis ASIS007202 I 0.847
ASTEI11371 Anopheles stephensi ASTEI11371 I 0.847
LLOJ006855 Lutzomyia longipalpis LLOJ006855 I 0.847
PPAI004616 Phlebotomus papatasi PPAI004616 I 0.847
D917_00294 Trichinella nativa D917_00294 I 0.847
TMUE_s0023002700 Trichuris muris TMUE_s0023002700 I 0.847
HMX1 Bos taurus ENSBTAG00000031197 I 0.846
Ocbimv22033981m.g Octopus bimaculoides Ocbimv22033981m.g I 0.846
RSKR_0000754000 Rhabditophanes kr3021 RSKR_0000754000 I 0.846
hmx3a Tetraodon nigroviridis ENSTNIG00000013351 I 0.845
BGLB009428 Biomphalaria glabrata BGLB009428 I 0.842
Bm2671 Brugia malayi Bm2671 I 0.840
LOAG_18706 Loa loa LOAG_18706 I 0.840
NEMVEDRAFT_v1g82763 Nematostella vectensis NEMVEDRAFT_v1g82763 I 0.840
SMU15030266 Schmidtea mediterranea SMU15030266 I 0.840
BTMF_0000078301 Brugia timori BTMF_0000078301 I 0.840
EEL_0001033501 Elaeophora elaphi EEL_0001033501 I 0.840
L596_g25600 Steinernema carpocapsae L596_g25600 I 0.840
L889_g29773 Steinernema feltiae L889_g29773 I 0.840
L892_g3191 Steinernema scapterisci L892_g3191 I 0.840
L893_g19514 Steinernema glaseri L893_g19514 I 0.840
L898_g3286 Steinernema monticolum L898_g3286 I 0.840
nAv.1.0.1.g04157 Acanthocheilonema viteae nAv.1.0.1.g04157 I 0.840
nDi.2.2.2.g05815 Dirofilaria immitis nDi.2.2.2.g05815 I 0.840
OFLC_0000059901 Onchocerca flexuosa OFLC_0000059901 I 0.840
ASU_01882 Ascaris suum ASU_01882 I 0.838
DME_0000203101 Dracunculus medinensis DME_0000203101 I 0.838
nLs.2.1.2.g05472 Litomosoides sigmodontis nLs.2.1.2.g05472 I 0.838
PEQ_0001449501 Parascaris equorum PEQ_0001449501 I 0.838
SSTP_0000875800 Strongyloides stercoralis SSTP_0000875800 I 0.838
TCNE_0001267401 Toxocara canis TCNE_0001267401 I 0.838
hmx1 Tetraodon nigroviridis ENSTNIG00000012045 I 0.837
ENSTRUG00000008472 Takifugu rubripes ENSTRUG00000008472 I 0.837
TCLT_0000478501 Thelazia callipaeda TCLT_0000478501 I 0.836
ENSGMOG00000007903 Gadus morhua ENSGMOG00000007903 I 0.835
HelroG148321 Helobdella robusta HelroG148321 I 0.835
SMU15025763 Schmidtea mediterranea SMU15025763 I 0.835
D915_06909 Fasciola hepatica D915_06909 I 0.835
D918_01446 Trichuris suis D918_01446 I 0.835
ECPE_0000559201 Echinostoma caproni ECPE_0000559201 I 0.835
PXEA_0002110801 Protopolystoma xenopodis PXEA_0002110801 I 0.835
TTAC_0000660601 Hydatigera taeniaeformis TTAC_0000660601 I 0.835
TTRE_0000017001 Trichuris trichiura TTRE_0000017001 I 0.835
DILT_0000300201 Diphyllobothrium latum DILT_0000300201 I 0.834
SPER_0000794701 Spirometra erinaceieuropaei SPER_0000794701 I 0.834
SSLN_0000910701 Schistocephalus solidus SSLN_0000910701 I 0.834
HelroG148580 Helobdella robusta HelroG148580 I 0.833
Smp_013600 Schistosoma mansoni Smp_013600 I 0.833
Gfo_R003222 Geospiza fortis Gfo_R003222 I 0.833
Sjc_0048780 Schistosoma japonicum Sjc_0048780 I 0.833
Minc12706 Meloidogyne incognita Minc12706 I 0.833
A_01646 Schistosoma haematobium A_01646 I 0.833
csin100621 Clonorchis sinensis csin100621 I 0.833
ECANG7_00785 Echinococcus canadensis ECANG7_00785 I 0.833
EmuJ_001005600 Echinococcus multilocularis EmuJ_001005600 I 0.833
EVEC_0000047101 Enterobius vermicularis EVEC_0000047101 I 0.833
HmN_000663500 Hymenolepis microstoma HmN_000663500 I 0.833
SMRZ_0001757601 Schistosoma margrebowiei SMRZ_0001757601 I 0.833
SMTD_0001463401 Schistosoma mattheei SMTD_0001463401 I 0.833
SMUV_0000537401 Syphacia muris SMUV_0000537401 I 0.833
SROB_0000769201 Schistosoma rodhaini SROB_0000769201 I 0.833
T265_08121 Opisthorchis viverrini T265_08121 I 0.833
HMX2 Bos taurus ENSBTAG00000017911 I 0.832
HMX2 Canis familiaris ENSCAFG00000012699 I 0.832
HMX2 Choloepus hoffmanni ENSCHOG00000010204 I 0.832
HMX2 Callithrix jacchus ENSCJAG00000001081 I 0.832
ENSCPOG00000011952 Cavia porcellus ENSCPOG00000011952 I 0.832
ENSCSAG00000004550 Chlorocebus sabaeus ENSCSAG00000004550 I 0.832
hmx2 Danio rerio ENSDARG00000070954 I 0.832
HMX2 Dasypus novemcinctus ENSDNOG00000007320 I 0.832
ENSDORG00000002863 Dipodomys ordii ENSDORG00000002863 I 0.832
HMX2 Erinaceus europaeus ENSEEUG00000007340 I 0.832
ENSFALG00000015281 Ficedula albicollis ENSFALG00000015281 I 0.832
HMX2 Homo sapiens ENSG00000188816 D 0.832
hmx2 Gasterosteus aculeatus ENSGACG00000009712 I 0.832
ENSGALG00000023414 Gallus gallus ENSGALG00000023414 I 0.832
HMX2 Gorilla gorilla ENSGGOG00000006144 I 0.832
ENSGMOG00000018353 Gadus morhua ENSGMOG00000018353 I 0.832
ENSLACG00000000874 Latimeria chalumnae ENSLACG00000000874 I 0.832
HMX2 Loxodonta africana ENSLAFG00000012760 I 0.832
ENSLOCG00000008191 Lepisosteus oculatus ENSLOCG00000008191 I 0.832
ENSMEUG00000010163 Macropus eugenii ENSMEUG00000010163 I 0.832
HMX2 Meleagris gallopavo ENSMGAG00000011617 I 0.832
HMX2 Microcebus murinus ENSMICG00000000468 I 0.832
ENSMMUG00000003091 Macaca mulatta ENSMMUG00000003091 I 0.832
HMX2 Monodelphis domestica ENSMODG00000007548 I 0.832
ENSMPUG00000002778 Mustela putorius furo ENSMPUG00000002778 I 0.832
Hmx2 Mus musculus ENSMUSG00000050100 D 0.832
HMX2 Oryctolagus cuniculus ENSOCUG00000014183 I 0.832
HMX2 Otolemur garnettii ENSOGAG00000011247 I 0.832
ENSONIG00000000530 Oreochromis niloticus ENSONIG00000000530 I 0.832
HMX2 Ochotona princeps ENSOPRG00000014263 I 0.832
hmx2 Oryzias latipes ENSORLG00000005586 I 0.832
ENSPANG00000020350 Papio anubis ENSPANG00000020350 I 0.832
HMX2 Procavia capensis ENSPCAG00000004188 I 0.832
ENSPFOG00000017912 Poecilia formosa ENSPFOG00000017912 I 0.832
ENSPPYG00000002730 Pongo abelii ENSPPYG00000002730 I 0.832
ENSPSIG00000008282 Pelodiscus sinensis ENSPSIG00000008282 I 0.832
HMX2 Pteropus vampyrus ENSPVAG00000015587 I 0.832
Hmx2 Rattus norvegicus ENSRNOG00000020638 I 0.832
ENSSHAG00000010480 Sarcophilus harrisii ENSSHAG00000010480 I 0.832
HMX2 Sus scrofa ENSSSCG00000010725 I 0.832
ENSSTOG00000000994 Ictidomys tridecemlineatus ENSSTOG00000000994 I 0.832
HMX2 Taeniopygia guttata ENSTGUG00000011380 I 0.832
hmx2 Tetraodon nigroviridis ENSTNIG00000013350 I 0.832
hmx2 Takifugu rubripes ENSTRUG00000001142 I 0.832
hmx2 Takifugu rubripes ENSTRUG00000003237 I 0.832
HMX2 Tursiops truncatus ENSTTRG00000016193 I 0.832
ENSXMAG00000018316 Xiphophorus maculatus ENSXMAG00000018316 I 0.832
Alligator_sinensis_CCG009969.1 Alligator sinensis Alligator_sinensis_CCG009969.1 I 0.832
Cmyd_10017006 Chelonia mydas Cmyd_10017006 I 0.832
Gfo_R011991 Geospiza fortis Gfo_R011991 I 0.832
Ogr10725 Ophisaurus gracilis Ogr10725 I 0.832
Pvit_17599 Pogona vitticeps Pvit_17599 I 0.832
hmx2 Xenopus tropicalis XB-GENE-480085 I 0.832
hmx2.S Xenopus laevis XB-GENE-865340 I 0.832
HMX2 Anolis carolinensis ENSACAG00000017493 I 0.828
ENSAMXG00000019214 Astyanax mexicanus ENSAMXG00000019214 I 0.828
ENSTSYG00000013450 Tarsius syrichta ENSTSYG00000013450 I 0.828
TsM_000727300 Taenia solium TsM_000727300 I 0.827
ACAC_0000308201 Angiostrongylus cantonensis ACAC_0000308201 I 0.824
ACOC_0001259801 Angiostrongylus costaricensis ACOC_0001259801 I 0.824
ANCCEY_06093 Ancylostoma ceylanicum ANCCEY_06093 I 0.824
ANCDUO_02264 Ancylostoma duodenale ANCDUO_02264 I 0.824
CGOC_0001167201 Cylicostephanus goldi CGOC_0001167201 I 0.824
DICVIV_08043 Dictyocaulus viviparus DICVIV_08043 I 0.824
HCOI01092600 Haemonchus contortus HCOI01092600 I 0.824
HCOI01286300 Haemonchus contortus HCOI01286300 I 0.824
NBR_0000965101 Nippostrongylus brasiliensis NBR_0000965101 I 0.824
SVUK_0001598501 Strongylus vulgaris SVUK_0001598501 I 0.824
TELCIR_05642 Teladorsagia circumcincta TELCIR_05642 I 0.824
PPA18303 Pristionchus pacificus PPA18303 I 0.822
HPBE_0001805601 Heligmosomoides bakeri HPBE_0001805601 I 0.822
scaffold125-EXSNAP2012.20 Pristionchus exspectatus scaffold125-EXSNAP2012.20 I 0.822
ENSAPLG00000000627 Anas platyrhynchos ENSAPLG00000000627 I 0.821
CBG14538 Caenorhabditis briggsae CBG14538 I 0.820
CBN01435 Caenorhabditis brenneri CBN01435 I 0.820
CRE00289 Caenorhabditis remanei CRE00289 I 0.820
HMX3 Equus caballus ENSECAG00000013787 I 0.820
CJA15094 Caenorhabditis japonica CJA15094 I 0.819
mls-2 Caenorhabditis elegans WBGene00003377 I 0.819
ENSGMOG00000007895 Gadus morhua ENSGMOG00000007895 I 0.818
Cmyd_10020952 Chelonia mydas Cmyd_10020952 I 0.815
ENSMODG00000028684 Monodelphis domestica ENSMODG00000028684 I 0.814
ENSSHAG00000008914 Sarcophilus harrisii ENSSHAG00000008914 I 0.814
TriadG50928 Trichoplax adhaerens TriadG50928 I 0.813
ENSAPLG00000015122 Anas platyrhynchos ENSAPLG00000015122 I 0.812
HNAJ_0000072501 Hymenolepis nana HNAJ_0000072501 I 0.812
maker-nMf.1.1.scaf00666-snap-gene-0.18 Meloidogyne floridensis maker-nMf.1.1.scaf00666-snap-gene-0.18 I 0.811
ENSFALG00000014798 Ficedula albicollis ENSFALG00000014798 I 0.804
ENSGALG00000015599 Gallus gallus ENSGALG00000015599 I 0.804
ENSTGUG00000010318 Taeniopygia guttata ENSTGUG00000010318 I 0.804
ENSPSIG00000014653 Pelodiscus sinensis ENSPSIG00000014653 I 0.802
BXY_1661400 Bursaphelenchus xylophilus BXY_1661400 I 0.798
WBGene00241687 Onchocerca volvulus WBGene00241687 I 0.797
nOo.2.0.1.g00528 Onchocerca ochengi nOo.2.0.1.g00528 I 0.797
ENSAPLG00000002119 Anas platyrhynchos ENSAPLG00000002119 I 0.794
Cmyd_10008158 Chelonia mydas Cmyd_10008158 I 0.793
PPA10611 Pristionchus pacificus PPA10611 I 0.791
scaffold158-EXSNAP2012.28 Pristionchus exspectatus scaffold158-EXSNAP2012.28 I 0.791
SNAPOd2T00013469001 Oikopleura dioica SNAPOd2T00013469001 I 0.790
ENSAMXG00000013484 Astyanax mexicanus ENSAMXG00000013484 I 0.774
hmx4 Danio rerio ENSDARG00000007941 I 0.774
hmx4 Gasterosteus aculeatus ENSGACG00000018365 I 0.774
ENSGACG00000019415 Gasterosteus aculeatus ENSGACG00000019415 I 0.774
ENSGMOG00000012659 Gadus morhua ENSGMOG00000012659 I 0.774
ENSLACG00000011234 Latimeria chalumnae ENSLACG00000011234 I 0.774
ENSLOCG00000010349 Lepisosteus oculatus ENSLOCG00000010349 I 0.774
ENSONIG00000001817 Oreochromis niloticus ENSONIG00000001817 I 0.774
ENSONIG00000003523 Oreochromis niloticus ENSONIG00000003523 I 0.774
hmx4 Oryzias latipes ENSORLG00000014420 I 0.774
ENSPFOG00000006257 Poecilia formosa ENSPFOG00000006257 I 0.774
ENSPFOG00000014605 Poecilia formosa ENSPFOG00000014605 I 0.774
ENSTNIG00000012044 Tetraodon nigroviridis ENSTNIG00000012044 I 0.774
hmx4 Takifugu rubripes ENSTRUG00000008456 I 0.774
ENSTRUG00000010890 Takifugu rubripes ENSTRUG00000010890 I 0.774
hmx4 Takifugu rubripes ENSTRUG00000015350 I 0.774
ENSXMAG00000000855 Xiphophorus maculatus ENSXMAG00000000855 I 0.774
ENSXMAG00000015835 Xiphophorus maculatus ENSXMAG00000015835 I 0.774
soho1 Xenopus tropicalis XB-GENE-876678 I 0.774
XP_002940266 Xenopus tropicalis XP_002940266 I 0.774
HMX2 Equus caballus ENSECAG00000012690 I 0.773
ENSORLG00000006068 Oryzias latipes ENSORLG00000006068 I 0.772
PPA10612 Pristionchus pacificus PPA10612 I 0.771
scaffold158-EXSNAP2012.29 Pristionchus exspectatus scaffold158-EXSNAP2012.29 I 0.771
ENSAMXG00000006894 Astyanax mexicanus ENSAMXG00000006894 I 0.769
ENSTNIG00000010149 Tetraodon nigroviridis ENSTNIG00000010149 I 0.769
CapteG80782 Capitella teleta CapteG80782 I 0.748
CapteG81827 Capitella teleta CapteG81827 I 0.748
CGI_10013448 Crassostrea gigas CGI_10013448 I 0.746
SMU15012869 Schmidtea mediterranea SMU15012869 I 0.743
ML008015a Mnemiopsis leidyi ML008015a I 0.711
PTRK_0000466000 Parastrongyloides trichosuri PTRK_0000466000 I 0.706
SPAL_0000384200 Strongyloides papillosus SPAL_0000384200 I 0.706
SSTP_0000875900 Strongyloides stercoralis SSTP_0000875900 I 0.706
SVE_0784100 Strongyloides venezuelensis SVE_0784100 I 0.706
CBG05118 Caenorhabditis briggsae CBG05118 I 0.687
CJA16312 Caenorhabditis japonica CJA16312 I 0.686
CJA36175 Caenorhabditis japonica CJA36175 I 0.686
CRE20805 Caenorhabditis remanei CRE20805 I 0.686
ceh-9 Caenorhabditis elegans WBGene00000434 I 0.686
CBN01016 Caenorhabditis brenneri CBN01016 I 0.685
CBN20043 Caenorhabditis brenneri CBN20043 I 0.685
mox Ciona intestinalis ENSCING00000007464 I 0.684
BGLB006779 Biomphalaria glabrata BGLB006779 I 0.684
ENSCSAVG00000006908 Ciona savignyi ENSCSAVG00000006908 I 0.682
HOXB4 Anolis carolinensis ENSACAG00000006499 I 0.679
HOXA4 Anolis carolinensis ENSACAG00000010390 I 0.679
HOXC4 Anolis carolinensis ENSACAG00000010955 I 0.679
ENSAMEG00000000697 Ailuropoda melanoleuca ENSAMEG00000000697 I 0.679
ENSAMXG00000009405 Astyanax mexicanus ENSAMXG00000009405 I 0.679
ENSAPLG00000011136 Anas platyrhynchos ENSAPLG00000011136 I 0.679
ENSAPLG00000013669 Anas platyrhynchos ENSAPLG00000013669 I 0.679
HOXC4 Bos taurus ENSBTAG00000003304 I 0.679
HOXC4 Canis familiaris ENSCAFG00000006611 I 0.679
HOXC4 Callithrix jacchus ENSCJAG00000035592 I 0.679
ENSCPOG00000020196 Cavia porcellus ENSCPOG00000020196 I 0.679
ENSCSAG00000005445 Chlorocebus sabaeus ENSCSAG00000005445 I 0.679
hoxc4a Danio rerio ENSDARG00000070338 I 0.679
HOXC4 Dasypus novemcinctus ENSDNOG00000046396 I 0.679
HOXC4 Equus caballus ENSECAG00000004202 I 0.679
HOXC4 Homo sapiens ENSG00000198353 D 0.679