MTR_7g103340 (Medicago truncatula)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 MTR_7g103340 T220854_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-51
M00867_2.00 		Arabidopsis thaliana
ATWATKNN
NNMATWAT		 PBM
Franco-Zorrilla et al.(2014)
ATHB51 		0.670 0.825
ATHB-51
M06927_2.00 		Arabidopsis thaliana
DNCAATAATTGAD
HTCAATTATTGNH		 Dap-seq
OMalley et al.(2016)
LMI1_col_a 		0.670 0.825
ATHB-51
M06928_2.00 		Arabidopsis thaliana
NDNCAATAATTGA
TCAATTATTGNHN		 Dap-seq
OMalley et al.(2016)
LMI1_colamp_a 		0.670 0.825
PK20392.1
M01250_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11331 		0.645 0.649
PK20392.1
M01251_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11332 		0.645 0.649
ATHB-22
M02041_2.00 		Arabidopsis thaliana
NNATAATWWWNNN
NNNWWWATTATNN		 PBM
Weirauch et al.(2014)
pTH5883 		0.636 0.684
ATHB-20
M06912_2.00 		Arabidopsis thaliana
HYAATAATTRD
HYAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_col_a 		0.625 0.632
ATHB-20
M06913_2.00 		Arabidopsis thaliana
HYAATMATTRD
HYAATKATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_colamp_a 		0.625 0.632
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH24094 Homeodomain 61 117

Links

Other Homeodomain family TFs
Other Medicago truncatula TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30054.m000819 Ricinus communis 30054.m000819 N
30128.m008737 Ricinus communis 30128.m008737 N
Aquca_005_00478 Aquilegia coerulea Aquca_005_00478 N
BGIOSGA026779 Oryza indica BGIOSGA026779 N
cassava13431.valid.m1 Manihot esculenta cassava13431.valid.m1 N
cassava19507.valid.m1 Manihot esculenta cassava19507.valid.m1 N
Ca_01181 Cicer arietinum Ca_01181 N
Ca_12363 Cicer arietinum Ca_12363 N
chr1.CM0544.580.nd Lotus japonicus chr1.CM0544.580.nd N
chr5.CM0211.190.nc Lotus japonicus chr5.CM0211.190.nc N
chr6.CM0738.340.nd Lotus japonicus chr6.CM0738.340.nd N
Cla020173 Citrullus lanatus Cla020173 N
Cucsa.091670 Cucumis sativus Cucsa.091670 N
Eucgr.E00273 Eucalyptus grandis Eucgr.E00273 N
Eucgr.H04468 Eucalyptus grandis Eucgr.H04468 N
evm.TU.supercontig_48.15 Carica papaya evm.TU.supercontig_48.15 N
gene02199-v1.0-hybrid Fragaria vesca gene02199-v1.0-hybrid N
GLYMA03G39990 Glycine max GLYMA03G39990 N
GLYMA06G35330 Glycine max GLYMA06G35330 N
GLYMA08G36590 Glycine max GLYMA08G36590 N
GLYMA19G42520 Glycine max GLYMA19G42520 N
Gorai.006G217200 Gossypium raimondii Gorai.006G217200 N
Gorai.008G225800 Gossypium raimondii Gorai.008G225800 N
GSMUA_Achr3G06660_001 Musa acuminata GSMUA_Achr3G06660_001 N
LPERR08G15350 Leersia perrieri LPERR08G15350 N
Lus10001271.g Linum usitatissimum Lus10001271.g N
Lus10009475.g Linum usitatissimum Lus10009475.g N
MDP0000267178 Malus domestica MDP0000267178 N
mgf015694m Mimulus guttatus mgf015694m N
MTR_7g113830 Medicago truncatula MTR_7g113830 N
MTR_8g066770 Medicago truncatula MTR_8g066770 N
OB08G25610 Oryza brachyantha OB08G25610 N
OBART08G18480 Oryza barthii OBART08G18480 N
OGLUM08G19420 Oryza glumaepatula OGLUM08G19420 N
OMERI08G14480 Oryza meridionalis OMERI08G14480 N
ONIVA08G20580 Oryza nivara ONIVA08G20580 N
OPUNC08G16410 Oryza punctata OPUNC08G16410 N
ORGLA08G0160400 Oryza glaberrima ORGLA08G0160400 N
ORUFI08G20670 Oryza rufipogon ORUFI08G20670 N
OS08G0483900 Oryza sativa OS08G0483900 N
Pavir.Fb01787 Panicum virgatum Pavir.Fb01787 N
PGSC0003DMG400017540 Solanum tuberosum PGSC0003DMG400017540 N
PGSC0003DMG400028578 Solanum tuberosum PGSC0003DMG400028578 N
POPTR_0001s02350 Populus trichocarpa POPTR_0001s02350 N
POPTR_0003s09200 Populus trichocarpa POPTR_0003s09200 N
POPTR_0005s04160 Populus trichocarpa POPTR_0005s04160 N
POPTR_0013s02680 Populus trichocarpa POPTR_0013s02680 N
SapurV1A.0092s0130 Salix purpurea SapurV1A.0092s0130 N
SapurV1A.0151s0200 Salix purpurea SapurV1A.0151s0200 N
SapurV1A.1055s0160 Salix purpurea SapurV1A.1055s0160 N
SapurV1A.1124s0170 Salix purpurea SapurV1A.1124s0170 N
Solyc08g076820.2 Solanum lycopersicum Solyc08g076820.2 N
TCM_015694 Theobroma cacao TCM_015694 N
TCM_026599 Theobroma cacao TCM_026599 N
VIT_14s0128g00110 Vitis vinifera VIT_14s0128g00110 N