CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ceh-9
(
Caenorhabditis elegans
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
WBGene00000434
T224601_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in cell differentiation and regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in several structures, including head muscle; head neurons; intestine; lumbar neurons; and somatic nervous system. [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NK7.1
M03847_2.00
Drosophila melanogaster
VTTAAAYGDTD
HAHCRTTTAAB
SELEX
Nitta et al.(2015)
NK7.1_1
0.789
0.807
NK7.1
M03848_2.00
Drosophila melanogaster
NSTTAATTGVY
RBCAATTAASN
SELEX
Nitta et al.(2015)
NK7.1_2
0.789
0.807
NK7.1
M06524_2.00
Drosophila melanogaster
TTAATDR
YHATTAA
B1H
Mathelier et al.(2014)
MA0196.1
0.789
0.807
NK7.1
M06323_2.00
Drosophila melanogaster
NTTAATDR
YHATTAAN
B1H
Zhu et al.(2011)
NK7.1_Cell_FBgn0024321
0.789
0.807
NK7.1
M06324_2.00
Drosophila melanogaster
YTAATDR
YHATTAR
B1H
Zhu et al.(2011)
NK7.1_SOLEXA_FBgn0024321
0.789
0.807
TLX2
M02087_2.00
Homo sapiens
NYRDNNNNNN
NNNNNNHYRN
PBM
Weirauch et al.(2014)
pTH6482
0.740
0.596
Tlx2
M00526_2.00
Mus musculus
WTTAAWTA
TAWTTAAW
PBM
Berger et al.(2008)
Tlx2_3498
0.740
0.596
TLX2
M05020_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
TLX2_eDBD_HT-SELEX
0.740
0.596
TLX2
M10672_2.00
Homo sapiens
BNGTAAKDNB
VNHMTTACNV
Transfac
Matys et al.(2006)
V$NCX_01
0.740
0.596
TLX2
M05021_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
TLX2_eDBD_Methyl-HT-SELEX
0.740
0.596
C15
M06505_2.00
Drosophila melanogaster
TTAAWKR
YMWTTAA
B1H
Mathelier et al.(2014)
MA0170.1
0.740
0.579
C15
M06289_2.00
Drosophila melanogaster
BTTAAWKR
YMWTTAAV
B1H
Zhu et al.(2011)
C15_Cell_FBgn0004863
0.740
0.579
C15
M06290_2.00
Drosophila melanogaster
NWTAAWKR
YMWTTAWN
B1H
Zhu et al.(2011)
C15_SOLEXA_FBgn0004863
0.740
0.579
HMX3
M03233_2.00
Homo sapiens
NNNTAAKTGNN
NNCAMTTANNN
SELEX
Jolma et al.(2013)
HMX3_1
0.699
0.667
Hmx
M03882_2.00
Drosophila melanogaster
NYRAKYGN
NCRMTYRN
SELEX
Nitta et al.(2015)
Hmx_1
0.699
0.667
Hmx
M06554_2.00
Drosophila melanogaster
TTAATTG
CAATTAA
B1H
Mathelier et al.(2014)
MA0192.1
0.699
0.667
Hmx
M06386_2.00
Drosophila melanogaster
TTAATTG
CAATTAA
B1H
Zhu et al.(2011)
Hmx_Cell_FBgn0085448
0.699
0.667
Hmx
M06387_2.00
Drosophila melanogaster
TTAATTG
CAATTAA
B1H
Zhu et al.(2011)
Hmx_SOLEXA_FBgn0085448
0.699
0.667
HMX3
M10754_2.00
Homo sapiens
CAAGTGCGTG
CACGCACTTG
Transfac
Matys et al.(2006)
V$HMX1_01
0.699
0.667
Hmx1
M00524_2.00
Mus musculus
NHDAKYRNNN
NNNYRMTHDN
PBM
Berger et al.(2008)
Hmx1_3423
0.699
0.649
HMX1
M03243_2.00
Homo sapiens
NNTTAAKTGNY
RNCAMTTAANN
SELEX
Jolma et al.(2013)
HMX1_1
0.699
0.649
HMX1
M05392_2.00
Homo sapiens
BNYAAKTGN
NCAMTTRNV
SELEX
Yin et al.(2017)
HMX1_eDBD_HT-SELEX
0.699
0.649
HMX1
M05393_2.00
Homo sapiens
VNYAAKTGB
VCAMTTRNB
SELEX
Yin et al.(2017)
HMX1_eDBD_Methyl-HT-SELEX
0.699
0.649
TLX3
M05233_2.00
Homo sapiens
NAATKGNNNNNNNNNNNNNCAATTN
NAATTGNNNNNNNNNNNNNCMATTN
SELEX
Yin et al.(2017)
TLX3_eDBD_HT-SELEX
0.696
0.596
TLX3
M05235_2.00
Homo sapiens
NAATTGNNNNNHNNNNCAATTN
NAATTGNNNNDNNNNNCAATTN
SELEX
Yin et al.(2017)
TLX3_FL_HT-SELEX
0.696
0.596
TLX3
M05234_2.00
Homo sapiens
NAATTGNNNNNNNNNNDCAATTD
HAATTGHNNNNNNNNNNCAATTN
SELEX
Yin et al.(2017)
TLX3_eDBD_Methyl-HT-SELEX
0.696
0.596
TLX3
M05236_2.00
Homo sapiens
HAATTRNNNNNNNNNYHATTV
BAATDRNNNNNNNNNYAATTD
SELEX
Yin et al.(2017)
TLX3_FL_Methyl-HT-SELEX
0.696
0.596
lms
M03863_2.00
Drosophila melanogaster
BTAATTRV
BYAATTAV
SELEX
Nitta et al.(2015)
CG13424_1
0.692
0.614
lms
M03864_2.00
Drosophila melanogaster
HTWATTRDWTDATTRR
YYAATHAWHYAATWAD
SELEX
Nitta et al.(2015)
lms_1
0.692
0.614
lms
M06536_2.00
Drosophila melanogaster
YTAATKR
YMATTAR
B1H
Mathelier et al.(2014)
MA0175.1
0.692
0.614
lms
M06347_2.00
Drosophila melanogaster
NYTAATKR
YMATTARN
B1H
Zhu et al.(2011)
CG13424_Cell_FBgn0034520
0.692
0.614
lms
M06348_2.00
Drosophila melanogaster
NNHTAATDRN
NYHATTADNN
B1H
Zhu et al.(2011)
CG13424_SOLEXA_2_FBgn0034520
0.692
0.614
lms
M06349_2.00
Drosophila melanogaster
YTAATKR
YMATTAR
B1H
Zhu et al.(2011)
CG13424_SOLEXA_FBgn0034520
0.692
0.614
Nkx1-1
M00442_2.00
Mus musculus
NNTAATNDNN
NNHNATTANN
PBM
Berger et al.(2008)
Nkx1-1_3856
0.690
0.596
Nkx1-2
M00503_2.00
Mus musculus
NNTAAWNDN
NHNWTTANN
PBM
Berger et al.(2008)
Nkx1-2_3214
0.690
0.596
Hmx3_CONSTRUCT
M00537_2.00
PBM CONSTRUCTS
NHDADYRNN
NNYRHTHDN
PBM
Berger et al.(2008)
Hmx3_3490
0.686
0.649
slou
M00557_2.00
Drosophila melanogaster
NNTAATDRN
NYHATTANN
PBM
Busser et al.(2012a)
Slou
0.686
0.579
slou
M03798_2.00
Drosophila melanogaster
VBTAATTRSB
VSYAATTAVB
SELEX
Nitta et al.(2015)
slou_1
0.686
0.579
slou
M06494_2.00
Drosophila melanogaster
YTAATKR
YMATTAR
B1H
Mathelier et al.(2014)
MA0245.1
0.686
0.579
slou
M06262_2.00
Drosophila melanogaster
BYTAATKR
YMATTARV
B1H
Zhu et al.(2011)
Slou_Cell_FBgn0002941
0.686
0.579
slou
M06263_2.00
Drosophila melanogaster
HTAATKR
YMATTAD
B1H
Zhu et al.(2011)
Slou_SOLEXA_FBgn0002941
0.686
0.579
Hmx2
M00507_2.00
Mus musculus
NHRANYGNNN
NNNCRNTYDN
PBM
Berger et al.(2008)
Hmx2_3424
0.680
0.632
HMX2
M03234_2.00
Homo sapiens
NNTTAAKTGNN
NNCAMTTAANN
SELEX
Jolma et al.(2013)
HMX2_1
0.680
0.632
HMX2
M05373_2.00
Homo sapiens
GNHRAKYGS
SCRMTYDNC
SELEX
Yin et al.(2017)
HMX2_eDBD_HT-SELEX
0.680
0.632
HMX2
M05375_2.00
Homo sapiens
NTTAAKTGNN
NNCAMTTAAN
SELEX
Yin et al.(2017)
HMX2_FL_HT-SELEX
0.680
0.632
HMX2
M05374_2.00
Homo sapiens
NNTAAKTGN
NCAMTTANN
SELEX
Yin et al.(2017)
HMX2_eDBD_Methyl-HT-SELEX
0.680
0.632
HMX2
M05376_2.00
Homo sapiens
NTTAAKTGNN
NNCAMTTAAN
SELEX
Yin et al.(2017)
HMX2_FL_Methyl-HT-SELEX
0.680
0.632
VAX2
M00284_2.00
Homo sapiens
NNTAATND
HNATTANN
PBM
Barrera et al.(2016)
VAX2_REF
0.675
0.509
Vax1
M00398_2.00
Mus musculus
NTAATNDNN
NNHNATTAN
PBM
Berger et al.(2008)
Vax1_3499
0.675
0.509
Vax2
M00464_2.00
Mus musculus
NTAATDDNN
NNHHATTAN
PBM
Berger et al.(2008)
Vax2_3500
0.675
0.509
VAX2
M03119_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Jolma et al.(2013)
VAX2_1
0.675
0.509
VAX2
M05030_2.00
Homo sapiens
BTAATTRV
BYAATTAV
SELEX
Yin et al.(2017)
VAX2_FL_HT-SELEX
0.675
0.509
Vax1
M10764_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VAX1_04
0.675
0.509
VAX2
M05031_2.00
Homo sapiens
BTAATTRV
BYAATTAV
SELEX
Yin et al.(2017)
VAX2_FL_Methyl-HT-SELEX
0.675
0.509
Hoxa4
M00383_2.00
Mus musculus
NTAATBDNN
NNHVATTAN
PBM
Berger et al.(2008)
Hoxa4_3426
0.673
0.544
HOXA4
M05381_2.00
Homo sapiens
NTAATKRY
RYMATTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_HT-SELEX
0.673
0.544
HOXA4
M10755_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA4_Q2
0.673
0.544
HOXA4
M05382_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_Methyl-HT-SELEX
0.673
0.544
HOXC4
M00330_2.00
Homo sapiens
YTAATTRB
VYAATTAR
PBM
Barrera et al.(2016)
HOXC4_REF
0.673
0.526
Hoxb4
M00479_2.00
Mus musculus
NTAATNDNN
NNHNATTAN
PBM
Berger et al.(2008)
Hoxb4_2627
0.673
0.526
Hoxc4
M00530_2.00
Mus musculus
NWAATNDNN
NNHNATTWN
PBM
Berger et al.(2008)
Hoxc4_3491
0.673
0.526
HOXB4
M05343_2.00
Homo sapiens
YTAATKAY
RTMATTAR
SELEX
Yin et al.(2017)
HOXB4_FL_HT-SELEX
0.673
0.526
HOXC4
M05385_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
HOXC4_FL_HT-SELEX
0.673
0.526
HOXD4
M05273_2.00
Homo sapiens
NTMATKRV
BYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_HT-SELEX
0.673
0.526
HOXD4
M05276_2.00
Homo sapiens
NTAATKRB
VYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_HT-SELEX
0.673
0.526
HOXB4
M09162_2.00
Homo sapiens
YTAATKRS
SYMATTAR
Misc
Kulakovskiy et al.(2013)
HXB4_HUMAN.H11MO.0.B
0.673
0.526
Hoxb4
M09204_2.00
Mus musculus
YTAATKRS
SYMATTAR
Misc
Kulakovskiy et al.(2013)
HXB4_MOUSE.H11MO.0.A
0.673
0.526
Hoxb4
M09576_2.00
Mus musculus
TGATDRATKRSN
NSYMATYHATCA
Misc
Heinz et al.(2010)
ES-Hoxb4_GSE34014
0.673
0.526
HOXC4
M00328_2.00
Homo sapiens
YTAATTAB
VTAATTAR
PBM
Barrera et al.(2016)
HOXC4_N178S
0.673
0.526
HOXC4
M00329_2.00
Homo sapiens
NTAATKRNN
NNYMATTAN
PBM
Barrera et al.(2016)
HOXC4_R158L
0.673
0.526
HOXB4
M05344_2.00
Homo sapiens
HTAAYGAY
RTCRTTAD
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_1
0.673
0.526
HOXB4
M05345_2.00
Homo sapiens
HTAAYKAB
VTMRTTAD
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_2
0.673
0.526
HOXC4
M05386_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_1
0.673
0.526
HOXC4
M05387_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_2
0.673
0.526
HOXD4
M05274_2.00
Homo sapiens
NTMATKRN
NYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_1
0.673
0.526
HOXD4
M05275_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_2
0.673
0.526
HOXD4
M05277_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_1
0.673
0.526
HOXD4
M05278_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_2
0.673
0.526
VAX2
M00283_2.00
Homo sapiens
NNTAAWNDNN
NNHNWTTANN
PBM
Barrera et al.(2016)
VAX2_L139M
0.669
0.491
lin-39
M08211_2.00
Caenorhabditis elegans
GATTGATG
CATCAATC
ChIP-seq
Contrino et al.(2012)
Mw154
0.662
0.561
lin-39
M09582_2.00
Caenorhabditis elegans
DTGATWRATK
MATYWATCAH
Misc
Heinz et al.(2010)
cElegans.L3-LIN39_modEncode
0.662
0.561
ceh-5
M02179_2.00
Caenorhabditis elegans
NNTAATDDN
NHHATTANN
PBM
Weirauch et al.(2014)
pTH6562
0.655
0.509
Emx2
M00495_2.00
Mus musculus
NTAATDDNN
NNHHATTAN
PBM
Berger et al.(2008)
Emx2_3420
0.654
0.526
EMX2
M03210_2.00
Homo sapiens
NBTAATTANN
NNTAATTAVN
SELEX
Jolma et al.(2013)
EMX2_1
0.654
0.526
EMX2
M03211_2.00
Homo sapiens
YMATTARBTAATKR
YMATTAVYTAATKR
SELEX
Jolma et al.(2013)
EMX2_2
0.654
0.526
E5
M03814_2.00
Drosophila melanogaster
STAATKNN
NNMATTAS
SELEX
Nitta et al.(2015)
E5_1
0.654
0.526
EMX2
M05281_2.00
Homo sapiens
YTAATKAB
VTMATTAR
SELEX
Yin et al.(2017)
EMX2_eDBD_HT-SELEX
0.654
0.526
E5
M06507_2.00
Drosophila melanogaster
BTAATKA
TMATTAV
B1H
Mathelier et al.(2014)
MA0189.1
0.654
0.526
E5
M06293_2.00
Drosophila melanogaster
NBTAATKA
TMATTAVN
B1H
Zhu et al.(2011)
E5_Cell_FBgn0008646
0.654
0.526
E5
M06294_2.00
Drosophila melanogaster
NTAATDR
YHATTAN
B1H
Zhu et al.(2011)
E5_SOLEXA_FBgn0008646
0.654
0.526
EMX2
M05282_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Yin et al.(2017)
EMX2_eDBD_Methyl-HT-SELEX
0.654
0.526
EMX1
M02088_2.00
Homo sapiens
NNTAATKANN
NNTMATTANN
PBM
Weirauch et al.(2014)
pTH5677
0.654
0.509
ems
M02114_2.00
Drosophila melanogaster
NTAATKRNB
VNYMATTAN
PBM
Weirauch et al.(2014)
pTH5673
0.654
0.509
EMX1
M03151_2.00
Homo sapiens
NBTAATTRNN
NNYAATTAVN
SELEX
Jolma et al.(2013)
EMX1_1
0.654
0.509
EMX1
M03152_2.00
Homo sapiens
YMATTARYTAATKR
YMATTARYTAATKR
SELEX
Jolma et al.(2013)
EMX1_2
0.654
0.509
ems
M03789_2.00
Drosophila melanogaster
BTAATTAN
NTAATTAV
SELEX
Nitta et al.(2015)
ems_1
0.654
0.509
ems
M03790_2.00
Drosophila melanogaster
BTAATTAVBVBTAATKRN
NYMATTAVBVBTAATTAV
SELEX
Nitta et al.(2015)
ems_2
0.654
0.509
ems
M03791_2.00
Drosophila melanogaster
BTAATKRN
NYMATTAV
SELEX
Nitta et al.(2015)
ems_3
0.654
0.509
ems
M03792_2.00
Drosophila melanogaster
STAATKRSSSSTAATKRV
BYMATTASSSSYMATTAS
SELEX
Nitta et al.(2015)
ems_4
0.654
0.509
EMX1
M05145_2.00
Homo sapiens
BTAATTAN
NTAATTAV
SELEX
Yin et al.(2017)
EMX1_eDBD_HT-SELEX
0.654
0.509
EMX1
M05147_2.00
Homo sapiens
BTAATTAV
BTAATTAV
SELEX
Yin et al.(2017)
EMX1_FL_HT-SELEX
0.654
0.509
ems
M06484_2.00
Drosophila melanogaster
HTAATKR
YMATTAD
B1H
Mathelier et al.(2014)
MA0219.1
0.654
0.509
ems
M06233_2.00
Drosophila melanogaster
WHTAATKR
YMATTADW
B1H
Zhu et al.(2011)
Ems_Cell_FBgn0000576
0.654
0.509
ems
M06234_2.00
Drosophila melanogaster
TSTMATHM
KDATKASA
B1H
Zhu et al.(2011)
ems_FlyReg_FBgn0000576
0.654
0.509
ems
M06235_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Zhu et al.(2011)
Ems_SOLEXA_FBgn0000576
0.654
0.509
ems
M09676_2.00
Drosophila melanogaster
WTWATGA
TCATWAW
Misc
Kulakovskiy et al.(2009)
ems
0.654
0.509
EMX1
M05146_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
EMX1_eDBD_Methyl-HT-SELEX
0.654
0.509
EMX1
M05148_2.00
Homo sapiens
BTAATTAN
NTAATTAV
SELEX
Yin et al.(2017)
EMX1_FL_Methyl-HT-SELEX
0.654
0.509
B-H1
M03829_2.00
Drosophila melanogaster
VNTAAWYGNN
NNCRWTTANB
SELEX
Nitta et al.(2015)
B-H1_1
0.651
0.579
B-H1
M03830_2.00
Drosophila melanogaster
SNTAADBGN
NCVHTTANS
SELEX
Nitta et al.(2015)
B-H1_2
0.651
0.579
B-H1
M06512_2.00
Drosophila melanogaster
HTAAWYG
CRWTTAD
B1H
Mathelier et al.(2014)
MA0168.1
0.651
0.579
Barhl1
M00433_2.00
Mus musculus
NTAAWNRNN
NNYNWTTAN
PBM
Berger et al.(2008)
Barhl1_2590
0.649
0.596
Barhl2
M00460_2.00
Mus musculus
NTAAWNRNN
NNYNWTTAN
PBM
Berger et al.(2008)
Barhl2_3868
0.649
0.596
BARHL2
M03157_2.00
Homo sapiens
NNTAAWYGNN
NNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_1
0.649
0.596
BARHL2
M03158_2.00
Homo sapiens
NNTAAWBGNN
NNCVWTTANN
SELEX
Jolma et al.(2013)
BARHL2_2
0.649
0.596
BARHL2
M03159_2.00
Homo sapiens
TAAWYGNNNNTAAWYR
YRWTTANNNNCRWTTA
SELEX
Jolma et al.(2013)
BARHL2_3
0.649
0.596
BARHL2
M03160_2.00
Homo sapiens
NNTAAWYGNH
DNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_4
0.649
0.596
BARHL2
M03161_2.00
Homo sapiens
NNTAAWYGNN
NNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_5
0.649
0.596
BARHL2
M03162_2.00
Homo sapiens
TAAWYGNYNHTAAWYG
CRWTTADNRNCRWTTA
SELEX
Jolma et al.(2013)
BARHL2_6
0.649
0.596
Barhl1
M03258_2.00
Mus musculus
NNTAAWYGNH
DNCRWTTANN
SELEX
Jolma et al.(2013)
Barhl1_1
0.649
0.596
Barhl1
M03259_2.00
Mus musculus
NNTAADNRNN
NNYNHTTANN
SELEX
Jolma et al.(2013)
Barhl1_2
0.649
0.596
Barhl1
M03260_2.00
Mus musculus
TAAWYGNYNNTAAWYG
CRWTTANNRNCRWTTA
SELEX
Jolma et al.(2013)
Barhl1_3
0.649
0.596
BARHL1
M05091_2.00
Homo sapiens
NTAAWYGN
NCRWTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_1
0.649
0.596
BARHL1
M05092_2.00
Homo sapiens
NTAADBGN
NCVHTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_2
0.649
0.596
BARHL2
M05164_2.00
Homo sapiens
HTAAAYGNY
RNCRTTTAD
SELEX
Yin et al.(2017)
BARHL2_eDBD_HT-SELEX_1
0.649
0.596
BARHL2
M05165_2.00
Homo sapiens
NTAAWTGNB
VNCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_eDBD_HT-SELEX_2
0.649
0.596
BARHL2
M05167_2.00
Homo sapiens
NTAAWYGN
NCRWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_HT-SELEX_1
0.649
0.596
BARHL2
M05168_2.00
Homo sapiens
NTAAWYGN
NCRWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_HT-SELEX_2
0.649
0.596
BARHL1
M05093_2.00
Homo sapiens
NTAADKGN
NCMHTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_Methyl-HT-SELEX
0.649
0.596
BARHL2
M05166_2.00
Homo sapiens
NTAAWTGNB
VNCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_eDBD_Methyl-HT-SELEX
0.649
0.596
BARHL2
M05169_2.00
Homo sapiens
NTAAWTGN
NCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_Methyl-HT-SELEX
0.649
0.596
B-H2
M03810_2.00
Drosophila melanogaster
VNTAAAYGNH
DNCRTTTANB
SELEX
Nitta et al.(2015)
B-H2_1
0.649
0.579
B-H2
M03811_2.00
Drosophila melanogaster
SNTAADBGN
NCVHTTANS
SELEX
Nitta et al.(2015)
B-H2_2
0.649
0.579
B-H2
M06503_2.00
Drosophila melanogaster
WTAATTG
CAATTAW
B1H
Mathelier et al.(2014)
MA0169.1
0.649
0.579
ENSTNIG00000006040
M02106_2.00
Tetraodon nigroviridis
NNNBTAAWHRBNN
NNVYDWTTAVNNN
PBM
Weirauch et al.(2014)
pTH6503
0.648
0.544
Pdx1
M00446_2.00
Mus musculus
NWRAYNNN
NNNRTYWN
PBM
Berger et al.(2008)
Ipf1_3815
0.637
0.544
SPU_026099
M02175_2.00
Strongylocentrotus purpuratus
KTAATTRB
VYAATTAM
PBM
Weirauch et al.(2014)
pTH6140
0.637
0.544
PDX1
M03155_2.00
Homo sapiens
NTAATTRNNNYTAATTRN
NYAATTARNNNYAATTAN
SELEX
Jolma et al.(2013)
PDX1_1
0.637
0.544
PDX1
M03156_2.00
Homo sapiens
BTAATKRN
NYMATTAV
SELEX
Jolma et al.(2013)
PDX1_2
0.637
0.544
PDX1
M05161_2.00
Homo sapiens
YTAATKRB
VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_HT-SELEX
0.637
0.544
PDX1
M09147_2.00
Homo sapiens
TGATWGATK
MATCWATCA
Misc
Kulakovskiy et al.(2013)
PDX1_HUMAN.H11MO.0.A
0.637
0.544
Pdx1
M09192_2.00
Mus musculus
VYTAATGRB
VYCATTARB
Misc
Kulakovskiy et al.(2013)
PDX1_MOUSE.H11MO.0.B
0.637
0.544
Pdx1
M09571_2.00
Mus musculus
TGATTRATKR
YMATYAATCA
Misc
Heinz et al.(2010)
Islet-Pdx1_SRA008281
0.637
0.544
PDX1
M10699_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_01
0.637
0.544
PDX1
M10700_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_02
0.637
0.544
PDX1
M10701_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_03
0.637
0.544
PDX1
M10702_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_04
0.637
0.544
PDX1
M10703_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_05
0.637
0.544
PDX1
M10704_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4_01
0.637
0.544
PDX1
M10705_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4
0.637
0.544
PDX1
M10706_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5_01
0.637
0.544
PDX1
M10707_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5
0.637
0.544
PDX1
M10708_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q6
0.637
0.544
PDX1
M05162_2.00
Homo sapiens
HTAAYGAB
VTCRTTAD
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_1
0.637
0.544
PDX1
M05163_2.00
Homo sapiens
YTAATKRB
VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_2
0.637
0.544
Hoxa5
M00478_2.00
Mus musculus
NTAATNDNN
NNHNATTAN
PBM
Berger et al.(2008)
Hoxa5_3415
0.636
0.526
Hoxb5
M00480_2.00
Mus musculus
NWDWTNNNN
NNNNAWHWN
PBM
Berger et al.(2008)
Hoxb5_3122
0.636
0.526
HOXB5
M03125_2.00
Homo sapiens
NNKAATKRNN
NNYMATTMNN
SELEX
Jolma et al.(2013)
HOXB5_1
0.636
0.526
HOXA5
M04968_2.00
Homo sapiens
STAATKRS
SYMATTAS
SELEX
Yin et al.(2017)
HOXA5_eDBD_HT-SELEX
0.636
0.526
HOXA5
M04971_2.00
Homo sapiens
NTMATKRB
VYMATKAN
SELEX
Yin et al.(2017)
HOXA5_FL_HT-SELEX
0.636
0.526
HOXB5
M05051_2.00
Homo sapiens
NTAATKRV
BYMATTAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_HT-SELEX
0.636
0.526
HOXB5
M05054_2.00
Homo sapiens
STMATKAB
VTMATKAS
SELEX
Yin et al.(2017)
HOXB5_FL_HT-SELEX
0.636
0.526
HOXA5
M10652_2.00
Homo sapiens
NGRDBKBDHNBAVTAATKRRGRDVDDDGSR
YSCHHHBHYCYYMATTABTVNDHVMVHYCN
Transfac
Matys et al.(2006)
V$HOX13_01
0.636
0.526
HOXA5
M08457_2.00
Homo sapiens
CDBWAATK
MATTWVHG
COMPILED
Mathelier et al.(2014)
MA0158.1
0.636
0.526
HOXA5
M04969_2.00
Homo sapiens
BTAATKRV
BYMATTAV
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_1
0.636
0.526
HOXA5
M04970_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_2
0.636
0.526
HOXA5
M04972_2.00
Homo sapiens
NTMATKRN
NYMATKAN
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_1
0.636
0.526
HOXA5
M04973_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_2
0.636
0.526
HOXB5
M05052_2.00
Homo sapiens
NTMATKRN
NYMATKAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_1
0.636
0.526
HOXB5
M05053_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_2
0.636
0.526
HOXB5
M05055_2.00
Homo sapiens
NTMATKAB
VTMATKAN
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_1
0.636
0.526
HOXB5
M05056_2.00
Homo sapiens
HTAAYGAY
RTCRTTAD
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_2
0.636
0.526
Scr
M03799_2.00
Drosophila melanogaster
BTAATKRB
VYMATTAV
SELEX
Nitta et al.(2015)
Scr_1
0.628
0.526
Scr
M06496_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Mathelier et al.(2014)
MA0203.1
0.628
0.526
Scr
M06266_2.00
Drosophila melanogaster
HVYTAATKA
TMATTARBD
B1H
Zhu et al.(2011)
Scr_Cell_FBgn0003339
0.628
0.526
Scr
M06267_2.00
Drosophila melanogaster
YTAATKR
YMATTAR
B1H
Zhu et al.(2011)
Scr_SOLEXA_FBgn0003339
0.628
0.526
Hoxc5
M00422_2.00
Mus musculus
NWRATND
HNATYWN
PBM
Berger et al.(2008)
Hoxc5_2630
0.628
0.509
Dfd
M03784_2.00
Drosophila melanogaster
VNTAAYKRBN
NVYMRTTANB
SELEX
Nitta et al.(2015)
Dfd_1
0.628
0.509
Dfd
M03785_2.00
Drosophila melanogaster
VYTAATKAYN
NRTMATTARB
SELEX
Nitta et al.(2015)
Dfd_2
0.628
0.509
Dfd
M06481_2.00
Drosophila melanogaster
YTAATGA
TCATTAR
B1H
Mathelier et al.(2014)
MA0186.1
0.628
0.509
Dfd
M06226_2.00
Drosophila melanogaster
VYTAATGA
TCATTAAB
B1H
Zhu et al.(2011)
Dfd_Cell_FBgn0000439
0.628
0.509
Dfd
M06227_2.00
Drosophila melanogaster
TTAATKRY
RYMATTAA
B1H
Zhu et al.(2011)
Dfd_FlyReg_FBgn0000439
0.628
0.509
Dfd
M06228_2.00
Drosophila melanogaster
NBTAATKR
YMATTAVN
B1H
Zhu et al.(2011)
Dfd_SOLEXA_FBgn0000439
0.628
0.509
Dfd
M09675_2.00
Drosophila melanogaster
TTAATKRB
VYMATTAA
Misc
Kulakovskiy et al.(2009)
Dfd
0.628
0.509
Dfd
M10784_2.00
Drosophila melanogaster
NNNNRKTAATNNNNNN
NNNNNNATTAMYNNNN
Transfac
Matys et al.(2006)
I$DFD_01
0.628
0.509
repo
M03826_2.00
Drosophila melanogaster
VTTAATTARB
VYTAATTAAB
SELEX
Nitta et al.(2015)
repo_1
0.628
0.509
repo
M03827_2.00
Drosophila melanogaster
VKYAATTRRN
NYYAATTRMB
SELEX
Nitta et al.(2015)
repo_2
0.628
0.509
repo
M03828_2.00
Drosophila melanogaster
VBYAATTRVNNBYAATTRVB
VBYAATTRVNNBYAATTRVB
SELEX
Nitta et al.(2015)
repo_3
0.628
0.509
repo
M06511_2.00
Drosophila melanogaster
TTAATTA
TAATTAA
B1H
Mathelier et al.(2014)
MA0240.1
0.628
0.509
repo
M06301_2.00
Drosophila melanogaster
DTTAATTA
TAATTAAH
B1H
Zhu et al.(2011)
Repo_Cell_FBgn0011701
0.628
0.509
repo
M06302_2.00
Drosophila melanogaster
YTAATTR
YAATTAR
B1H
Zhu et al.(2011)
Repo_SOLEXA_FBgn0011701
0.628
0.509
zen2
M02118_2.00
Drosophila melanogaster
NNTAATKRNN
NNYMATTANN
PBM
Weirauch et al.(2014)
pTH5479
0.627
0.561
zen2
M03806_2.00
Drosophila melanogaster
BTAATKAS
STMATTAV
SELEX
Nitta et al.(2015)
zen2_1
0.627
0.561
zen2
M03807_2.00
Drosophila melanogaster
BTAATKWNNVRNNNNYBNNWMATTAV
BTAATKWNNVRNNNNYBNNWMATTAV
SELEX
Nitta et al.(2015)
zen2_2
0.627
0.561
zen2
M06501_2.00
Drosophila melanogaster
BTAATKA
TMATTAV
B1H
Mathelier et al.(2014)
MA0257.1
0.627
0.561
zen2
M06279_2.00
Drosophila melanogaster
HNBTAATKA
TMATTAVND
B1H
Zhu et al.(2011)
Zen2_Cell_FBgn0004054
0.627
0.561
zen2
M06280_2.00
Drosophila melanogaster
NNNTAATKRN
NYMATTANNN
B1H
Zhu et al.(2011)
zen2_SOLEXA_2_FBgn0004054
0.627
0.561
zen2
M06281_2.00
Drosophila melanogaster
YTAATKR
YMATTAR
B1H
Zhu et al.(2011)
Zen2_SOLEXA_FBgn0004054
0.627
0.561
ind
M06527_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Mathelier et al.(2014)
MA0228.1
0.624
0.544
ind
M06329_2.00
Drosophila melanogaster
YVYTAATKA
TMATTARBR
B1H
Zhu et al.(2011)
Ind_Cell_FBgn0025776
0.624
0.544
zen
M03805_2.00
Drosophila melanogaster
BTAATKRB
VYMATTAV
SELEX
Nitta et al.(2015)
zen_1
0.624
0.526
zen
M06500_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Mathelier et al.(2014)
MA0256.1
0.624
0.526
zen
M06276_2.00
Drosophila melanogaster
NBYTAATKA
TMATTARBN
B1H
Zhu et al.(2011)
Zen_Cell_FBgn0004053
0.624
0.526
zen
M06277_2.00
Drosophila melanogaster
AANWTWAWTG
CAWTWAWNTT
B1H
Zhu et al.(2011)
zen_FlyReg_FBgn0004053
0.624
0.526
zen
M06278_2.00
Drosophila melanogaster
NYTAATKA
TMATTARN
B1H
Zhu et al.(2011)
Zen_SOLEXA_FBgn0004053
0.624
0.526
CG11085
M03857_2.00
Drosophila melanogaster
BTAAWYGN
NCRWTTAV
SELEX
Nitta et al.(2015)
CG11085_1
0.623
0.526
CG11085
M03858_2.00
Drosophila melanogaster
NTAAWCGN
NCGWTTAN
SELEX
Nitta et al.(2015)
CG11085_2
0.623
0.526
CG11085
M06532_2.00
Drosophila melanogaster
TTAATDG
CHATTAA
B1H
Mathelier et al.(2014)
MA0171.1
0.623
0.526
CG11085
M06339_2.00
Drosophila melanogaster
NTTAATDGV
BCHATTAAN
B1H
Zhu et al.(2011)
CG11085_Cell_FBgn0030408
0.623
0.526
CG11085
M06340_2.00
Drosophila melanogaster
NHTAAWBRNN
NNYVWTTADN
B1H
Zhu et al.(2011)
CG11085_SOLEXA_FBgn0030408
0.623
0.526
Q0N4M8_NEMVE
M02166_2.00
Nematostella vectensis
HTAATKAC
GTMATTAD
PBM
Weirauch et al.(2014)
pTH6215
0.622
0.561
Hoxa3
M00172_2.00
Mus musculus
NTAATKRNNN
NNNYMATTAN
PBM
Badis et al.(2009)
Hoxa3_2783
0.620
0.526
Hoxa3
M00532_2.00
Mus musculus
NTAATKRNN
NNYMATTAN
PBM
Berger et al.(2008)
Hoxa3_2783
0.620
0.526
HOXA3
M10651_2.00
Homo sapiens
SVTWNDDKB
VMHHNWABS
Transfac
Matys et al.(2006)
V$HOXA3_01
0.620
0.526
Hoxb3
M00504_2.00
Mus musculus
NTAATKRNN
NNYMATTAN
PBM
Berger et al.(2008)
Hoxb3_1720
0.620
0.509
HOXB3
M03126_2.00
Homo sapiens
NBTAATKRNN
NNYMATTAVN
SELEX
Jolma et al.(2013)
HOXB3_1
0.620
0.509
CG18599
M06539_2.00
Drosophila melanogaster
HTAATKA
TMATTAD
B1H
Mathelier et al.(2014)
MA0177.1
0.616
0.491
CG18599
M06354_2.00
Drosophila melanogaster
HTAATKA
TMATTAD
B1H
Zhu et al.(2011)
CG18599_Cell_FBgn0038592
0.616
0.491
CG18599
M06355_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Zhu et al.(2011)
CG18599_SOLEXA_FBgn0038592
0.616
0.491
Q70HR3_PLEPI
M02210_2.00
Pleurobrachia pileus
NVVTACTWRD
HYWAGTABBN
PBM
Weirauch et al.(2014)
pTH6529
0.614
0.544
NOBOX
M02084_2.00
Homo sapiens
NNHDATDRNN
NNYHATHDNN
PBM
Weirauch et al.(2014)
pTH6448
0.613
0.456
AAZ08039
M02221_2.00
Xenopus tropicalis
NHTAATTRNN
NNYAATTADN
PBM
Weirauch et al.(2014)
pTH5791
0.613
0.456
Gsx2
M00469_2.00
Mus musculus
NTAATDDNN
NNHHATTAN
PBM
Berger et al.(2008)
Gsh2_3990
0.612
0.526
GSX1
M03205_2.00
Homo sapiens
NNTAATKRNN
NNYMATTANN
SELEX
Jolma et al.(2013)
GSX1_1
0.612
0.526
GSX2
M03227_2.00
Homo sapiens
NNTAATKRNN
NNYMATTANN
SELEX
Jolma et al.(2013)
GSX2_1
0.612
0.526
GSX1
M05271_2.00
Homo sapiens
NYMATNRN
NYNATKRN
SELEX
Yin et al.(2017)
GSX1_eDBD_HT-SELEX
0.612
0.526
GSX2
M05329_2.00
Homo sapiens
HTAATKRS
SYMATTAD
SELEX
Yin et al.(2017)
GSX2_eDBD_HT-SELEX
0.612
0.526
GSX1
M05272_2.00
Homo sapiens
NTAAYGAB
VTCRTTAN
SELEX
Yin et al.(2017)
GSX1_eDBD_Methyl-HT-SELEX
0.612
0.526
GSX2
M05330_2.00
Homo sapiens
HTAAYGAB
VTCRTTAD
SELEX
Yin et al.(2017)
GSX2_eDBD_Methyl-HT-SELEX
0.612
0.526
Hoxd3
M00531_2.00
Mus musculus
NTAATNDN
NHNATTAN
PBM
Berger et al.(2008)
Hoxd3_1742
0.612
0.509
Hoxd3
M03287_2.00
Mus musculus
NNTAATKRNN
NNYMATTANN
SELEX
Jolma et al.(2013)
Hoxd3_1
0.612
0.509
HOXD3
M05101_2.00
Homo sapiens
CTAATTAS
STAATTAG
SELEX
Yin et al.(2017)
HOXD3_FL_HT-SELEX
0.612
0.509
HOXD3
M05102_2.00
Homo sapiens
YTAAYGAY
RTCRTTAR
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_1
0.612
0.509
HOXD3
M05103_2.00
Homo sapiens
CTAATKAC
GTMATTAG
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_2
0.612
0.509
Nobox
M00448_2.00
Mus musculus
NHDABDRNN
NNYHVTHDN
PBM
Berger et al.(2008)
Og2x_3719
0.611
0.421
Nobox
M02688_2.00
Mus musculus
TAATTRSB
VSYAATTA
SELEX
Mathelier et al.(2014)
MA0125.1
0.611
0.421
Nobox
M09194_2.00
Mus musculus
HTAATTRVB
VBYAATTAD
Misc
Kulakovskiy et al.(2013)
NOBOX_MOUSE.H11MO.0.C
0.611
0.421
Nobox
M10766_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OG2_01
0.611
0.421
En1
M00519_2.00
Mus musculus
HNWTNNN
NNNAWND
PBM
Berger et al.(2008)
En1_3123
0.611
0.439
EN1
M03180_2.00
Homo sapiens
NNTAATTRVB
VBYAATTANN
SELEX
Jolma et al.(2013)
EN1_1
0.611
0.439
EN1
M03181_2.00
Homo sapiens
TAATTRSNYAATTA
TAATTRNSYAATTA
SELEX
Jolma et al.(2013)
EN1_2
0.611
0.439
EN1
M03182_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Jolma et al.(2013)
EN1_3
0.611
0.439
EN1
M03183_2.00
Homo sapiens
TDAKKRSNYMATTA
TAATKRNSYMMTHA
SELEX
Jolma et al.(2013)
EN1_4
0.611
0.439
EN1
M05218_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
EN1_eDBD_HT-SELEX
0.611
0.439
EN1
M05871_2.00
Homo sapiens
VNYAATTA
TAATTRNB
SMiLE-seq
Isakova et al.(2017)
EN1
0.611
0.439
EN1
M10714_2.00
Homo sapiens
RTDDTBB
VVAHHAY
Transfac
Matys et al.(2006)
V$EN1_01
0.611
0.439
EN1
M05219_2.00
Homo sapiens
NTAAYGAB
VTCRTTAN
SELEX
Yin et al.(2017)
EN1_eDBD_Methyl-HT-SELEX_1
0.611
0.439
EN1
M05220_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
EN1_eDBD_Methyl-HT-SELEX_2
0.611
0.439
Bsx
M00516_2.00
Mus musculus
NTAAYBDNN
NNHVRTTAN
PBM
Berger et al.(2008)
Bsx_3483
0.609
0.596
bsh
M02113_2.00
Drosophila melanogaster
NNTAAYBDNN
NNHVRTTANN
PBM
Weirauch et al.(2014)
pTH6569
0.609
0.596
BSX
M03235_2.00
Homo sapiens
NTAATBRN
NYVATTAN
SELEX
Jolma et al.(2013)
BSX_1
0.609
0.596
bsh
M03786_2.00
Drosophila melanogaster
TAATYTAATTA
TAATTARATTA
SELEX
Nitta et al.(2015)
bsh_1
0.609
0.596
bsh
M03787_2.00
Drosophila melanogaster
TAATTRVWTAATKR
YMATTAWBYAATTA
SELEX
Nitta et al.(2015)
bsh_2
0.609
0.596
bsh
M03788_2.00
Drosophila melanogaster
NTAATBRN
NYVATTAN
SELEX
Nitta et al.(2015)
bsh_3
0.609
0.596
BSX
M05377_2.00
Homo sapiens
NTAAYGHB
VDCRTTAN
SELEX
Yin et al.(2017)
BSX_eDBD_HT-SELEX_1
0.609
0.596
BSX
M05378_2.00
Homo sapiens
BTAATBRV
BYVATTAV
SELEX
Yin et al.(2017)
BSX_eDBD_HT-SELEX_2
0.609
0.596
bsh
M06483_2.00
Drosophila melanogaster
YTAATBR
YVATTAR
B1H
Mathelier et al.(2014)
MA0214.1
0.609
0.596
bsh
M06231_2.00
Drosophila melanogaster
HYTAATBRV
BYVATTARD
B1H
Zhu et al.(2011)
Bsh_Cell_FBgn0000529
0.609
0.596
bsh
M06232_2.00
Drosophila melanogaster
NTAATKR
YMATTAN
B1H
Zhu et al.(2011)
Bsh_SOLEXA_FBgn0000529
0.609
0.596
BSX
M05379_2.00
Homo sapiens
NTAAYGHB
VDCRTTAN
SELEX
Yin et al.(2017)
BSX_eDBD_Methyl-HT-SELEX_1
0.609
0.596
BSX
M05380_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
BSX_eDBD_Methyl-HT-SELEX_2
0.609
0.596
inv
M06491_2.00
Drosophila melanogaster
DYTAATTR
YAATTARH
B1H
Mathelier et al.(2014)
MA0229.1
0.609
0.456
inv
M06255_2.00
Drosophila melanogaster
DYTAATTR
YAATTARH
B1H
Zhu et al.(2011)
Inv_Cell_FBgn0001269
0.609
0.456
inv
M06256_2.00
Drosophila melanogaster
NHTAATTRV
BYAATTADN
B1H
Zhu et al.(2011)
inv_SOLEXA_2_FBgn0001269
0.609
0.456
inv
M06257_2.00
Drosophila melanogaster
NHTAATTRV
BYAATTADN
B1H
Zhu et al.(2011)
inv_SOLEXA_5_FBgn0001269
0.609
0.456
En2
M00484_2.00
Mus musculus
NNYHATHN
NDATDRNN
PBM
Berger et al.(2008)
En2_0952
0.606
0.439
EN2
M03189_2.00
Homo sapiens
NNTAATTRNN
NNYAATTANN
SELEX
Jolma et al.(2013)
EN2_1
0.606
0.439
EN2
M03190_2.00
Homo sapiens
VBTAATTRNN
NNYAATTAVB
SELEX
Jolma et al.(2013)
EN2_2
0.606
0.439
En2
M03276_2.00
Mus musculus
VBTAATTASN
NSTAATTAVB
SELEX
Jolma et al.(2013)
En2_1
0.606
0.439
EN2
M05237_2.00
Homo sapiens
BTAATTRV
BYAATTAV
SELEX
Yin et al.(2017)
EN2_eDBD_HT-SELEX
0.606
0.439
EN2
M05238_2.00
Homo sapiens
VHTDAYGHB
VDCRTHADB
SELEX
Yin et al.(2017)
EN2_eDBD_Methyl-HT-SELEX_1
0.606
0.439
EN2
M05239_2.00
Homo sapiens
BTAATTRV
BYAATTAV
SELEX
Yin et al.(2017)
EN2_eDBD_Methyl-HT-SELEX_2
0.606
0.439
en
M03793_2.00
Drosophila melanogaster
NTAATTRN
NYAATTAN
SELEX
Nitta et al.(2015)
en_1
0.605
0.439
en
M06485_2.00
Drosophila melanogaster
YTAATTR
YAATTAR
B1H
Mathelier et al.(2014)
MA0220.1
0.605
0.439
en
M06236_2.00
Drosophila melanogaster
NYTAATTR
YAATTARN
B1H
Zhu et al.(2011)
En_Cell_FBgn0000577
0.605
0.439
en
M06237_2.00
Drosophila melanogaster
DBTAATKR
YMATTAVH
B1H
Zhu et al.(2011)
en_FlyReg_FBgn0000577
0.605
0.439
en
M06238_2.00
Drosophila melanogaster
NNNTAATTRN
NYAATTANNN
B1H
Zhu et al.(2011)
en_SOLEXA_2_FBgn0000577
0.605
0.439
en
M06239_2.00
Drosophila melanogaster
NTAATTR
YAATTAN
B1H
Zhu et al.(2011)
En_SOLEXA_FBgn0000577
0.605
0.439
en
M09677_2.00
Drosophila melanogaster
HTAATTRN
NYAATTAD
Misc
Kulakovskiy et al.(2009)
en
0.605
0.439
en
M10785_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$EN_Q6
0.605
0.439
Noto
M02101_2.00
Mus musculus
NNHHATDDNN
NNHHATDDNN
PBM
Weirauch et al.(2014)
pTH6268
0.602
0.526
NEMVEDRAFT_v1g8907
M02154_2.00
Nematostella vectensis
NTAATDRNNN
NNNYHATTAN
PBM
Weirauch et al.(2014)
pTH6483
0.601
0.509
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Y65B4BR.9
Homeodomain
71
127
KKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKIWFQNRRTKWKK
Links
Other
Homeodomain
family TFs
Other
Caenorhabditis elegans
TFs
3551 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy