Pm010515 (Prunus mume)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Pm010515 T226652_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-9
M06898_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
PHV_col_a 		0.802 0.930
ATHB-9
M02682_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 SELEX
Mathelier et al.(2014)
MA0573.1 		0.802 0.930
ATHB-9
M10623_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 Transfac
Matys et al.(2006)
P$ATHB9_01 		0.802 0.930
ATHB-15
M00864_2.00 		Arabidopsis thaliana
AATAATTACT
AGTAATTATT		 PBM
Franco-Zorrilla et al.(2014)
ICU4 		0.797 0.895
ATHB-15
M06899_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
ATHB15_col_a 		0.797 0.895
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm010515 Homeodomain 19 79

Links

Other Homeodomain family TFs
Other Prunus mume TFs

335 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
13508_YKL043W Saccharomyces mikatae 13508_YKL043W I 0.000
14607_YKL043W Saccharomyces bayanus 14607_YKL043W I 0.000
16462_YMR016C Saccharomyces mikatae 16462_YMR016C I 0.000
17269_YMR016C Saccharomyces paradoxus 17269_YMR016C I 0.000
17689_YMR016C Saccharomyces bayanus 17689_YMR016C I 0.000
AGOS_ABR055C Ashbya gossypii AGOS_ABR055C I 0.000
BN7_6724 Wickerhamomyces ciferrii BN7_6724 I 0.000
CAGL0L01771g Candida glabrata CAGL0L01771g I 0.000
CaO19.610 Candida albicans CaO19.610 I 0.000
CaO19.8243 Candida albicans CaO19.8243 I 0.000
CD36_33560 Candida dubliniensis CD36_33560 I 0.000
CLUG_02047 Clavispora lusitaniae CLUG_02047 I 0.000
CLUG_02047 Candida lusitaniae CLUG_02047 I 0.000
CORT_0G01760 Candida orthopsilosis CORT_0G01760 I 0.000
CPAG_00178 Candida parapsilosis CPAG_00178 I 0.000
DEHA2E10978g Debaryomyces hansenii DEHA2E10978g I 0.000
Ecym_4584 Eremothecium cymbalariae Ecym_4584 I 0.000
estExt_fgenesh1_pg.C_chr_3.10654 Pichia stipitis estExt_fgenesh1_pg.C_chr_3.10654 I 0.000
G210_4810 Candida maltosa G210_4810 I 0.000
GNLVRS01_PISO0E14370g Millerozyma farinosa GNLVRS01_PISO0E14370g I 0.000
GNLVRS01_PISO0F15757g Millerozyma farinosa GNLVRS01_PISO0F15757g I 0.000
HPODL_01835 Ogataea parapolymorpha HPODL_01835 I 0.000
HPODL_04965 Ogataea parapolymorpha HPODL_04965 I 0.000
JL09_g3139 Pichia kudriavzevii JL09_g3139 I 0.000
KAFR_0A02120 Kazachstania africana KAFR_0A02120 I 0.000
KAFR_0B01410 Kazachstania africana KAFR_0B01410 I 0.000
KLLA0_F04840g Kluyveromyces lactis KLLA0_F04840g I 0.000
KLTH0D07876g Lachancea thermotolerans KLTH0D07876g I 0.000
KLTH0D07876g Kluyveromyces thermotolerans KLTH0D07876g I 0.000
Kpol_460p25 Vanderwaltozyma polyspora Kpol_460p25 I 0.000
KUCA_T00004103001 Kuraishia capsulata KUCA_T00004103001 I 0.000
Kwal_8176 Kluyveromyces waltii Kwal_8176 I 0.000
LALA0_S02e00628g Lachancea lanzarotensis LALA0_S02e00628g I 0.000
LELG_05390 Lodderomyces elongisporus LELG_05390 I 0.000
NCAS_0A04710 Naumovozyma castellii NCAS_0A04710 I 0.000
PAS_chr1-4_0530 Komagataella pastoris PAS_chr1-4_0530 I 0.000
PGUG_03651 Candida guilliermondii PGUG_03651 I 0.000
PGUG_03651 Meyerozyma guilliermondii PGUG_03651 I 0.000
PHD1 Saccharomyces cerevisiae YKL043W D 0.000
PICST_67427 Scheffersomyces stipitis PICST_67427 I 0.000
SAKL0D13442g Lachancea kluyveri SAKL0D13442g I 0.000
Scas_Contig625.8 Saccharomyces castellii Scas_Contig625.8 I 0.000
SKUD_205409 Saccharomyces kudriavzevii SKUD_205409 I 0.000
SKUD_205603 Saccharomyces kudriavzevii SKUD_205603 I 0.000
SOK2 Saccharomyces cerevisiae YMR016C D 0.000
SPAPADRAFT_59209 Spathaspora passalidarum SPAPADRAFT_59209 I 0.000
SU7_2504 Saccharomyces arboricola SU7_2504 I 0.000
TDEL_0B06530 Torulaspora delbrueckii TDEL_0B06530 I 0.000
XP_002490663.1 Pichia pastoris XP_002490663.1 I 0.000
YALI0_D01573g Yarrowia lipolytica YALI0_D01573g I 0.000
ZBAI_03487 Zygosaccharomyces bailii ZBAI_03487 I 0.000
ZBAI_08486 Zygosaccharomyces bailii ZBAI_08486 I 0.000
ZYRO0E06248g Zygosaccharomyces rouxii ZYRO0E06248g I 0.000