Ocbimv22027669m.g (Octopus bimaculoides)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Ocbimv22027669m.g T227825_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.808 0.877
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.808 0.877
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.808 0.877
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.808 0.877
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.808 0.877
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.808 0.877
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.800 0.842
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.800 0.842
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.800 0.842
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.800 0.842
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.800 0.842
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.800 0.842
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.788 0.877
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.776 0.842
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22027669m.p Homeodomain 7 66

Links

Other Homeodomain family TFs
Other Octopus bimaculoides TFs

387 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AABR07019870.1 Rattus norvegicus ENSRNOG00000038033 N
AABR07025074.1 Rattus norvegicus ENSRNOG00000032550 N
AAC59859 Xenopus laevis AAC59859 N
AAH73449 Xenopus laevis AAH73449 N
AC135696.1 Rattus norvegicus ENSRNOG00000058908 N
Alligator_sinensis_CCG007907.1 Alligator sinensis Alligator_sinensis_CCG007907.1 N
BAA06440 Xenopus laevis BAA06440 N
ENSAMXG00000014832 Astyanax mexicanus ENSAMXG00000014832 N
ENSBTAG00000005098 Bos taurus ENSBTAG00000005098 N
ENSBTAG00000015315 Bos taurus ENSBTAG00000015315 N
ENSBTAG00000020685 Bos taurus ENSBTAG00000020685 N
ENSBTAG00000031711 Bos taurus ENSBTAG00000031711 N
ENSBTAP00000049034-D1 Bos grunniens ENSBTAP00000049034-D1 N
ENSBTAP00000049357-D1 Bos grunniens ENSBTAP00000049357-D1 N
ENSBTAP00000052990-D1 Bos grunniens ENSBTAP00000052990-D1 N
ENSCAFG00000023930 Canis familiaris ENSCAFG00000023930 N
ENSCJAG00000007095 Callithrix jacchus ENSCJAG00000007095 N
ENSCJAG00000007419 Callithrix jacchus ENSCJAG00000007419 N
ENSCJAG00000008378 Callithrix jacchus ENSCJAG00000008378 N
ENSCJAG00000008384 Callithrix jacchus ENSCJAG00000008384 N
ENSCJAG00000011146 Callithrix jacchus ENSCJAG00000011146 N
ENSCJAG00000014197 Callithrix jacchus ENSCJAG00000014197 N
ENSCJAG00000014214 Callithrix jacchus ENSCJAG00000014214 N
ENSCJAG00000014991 Callithrix jacchus ENSCJAG00000014991 N
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N
ENSCJAG00000033913 Callithrix jacchus ENSCJAG00000033913 N
ENSCPOG00000003985 Cavia porcellus ENSCPOG00000003985 N
ENSCSAG00000012719 Chlorocebus sabaeus ENSCSAG00000012719 N
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N
ENSCSAG00000015385 Chlorocebus sabaeus ENSCSAG00000015385 N
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N
ENSDNOG00000036626 Dasypus novemcinctus ENSDNOG00000036626 N
ENSDNOG00000041663 Dasypus novemcinctus ENSDNOG00000041663 N
ENSDNOG00000046844 Dasypus novemcinctus ENSDNOG00000046844 N
ENSDNOG00000047452 Dasypus novemcinctus ENSDNOG00000047452 N
ENSECAG00000003655 Equus caballus ENSECAG00000003655 N
ENSECAG00000005186 Equus caballus ENSECAG00000005186 N
ENSETEG00000009246 Echinops telfairi ENSETEG00000009246 N
ENSETEG00000013458 Echinops telfairi ENSETEG00000013458 N
ENSETEG00000016379 Echinops telfairi ENSETEG00000016379 N
ENSFCAG00000028961 Felis catus ENSFCAG00000028961 N
ENSGGOG00000007804 Gorilla gorilla ENSGGOG00000007804 N
ENSGGOG00000025109 Gorilla gorilla ENSGGOG00000025109 N
ENSGMOG00000010657 Gadus morhua ENSGMOG00000010657 N
ENSLAFG00000030388 Loxodonta africana ENSLAFG00000030388 N
ENSMEUG00000009480 Macropus eugenii ENSMEUG00000009480 N
ENSMEUG00000011289 Macropus eugenii ENSMEUG00000011289 N
ENSMICG00000000573 Microcebus murinus ENSMICG00000000573 N
ENSMICG00000016224 Microcebus murinus ENSMICG00000016224 N
ENSMLUG00000028530 Myotis lucifugus ENSMLUG00000028530 N
ENSMMUG00000001275 Macaca mulatta ENSMMUG00000001275 N
ENSMMUG00000002662 Macaca mulatta ENSMMUG00000002662 N
ENSMMUG00000013266 Macaca mulatta ENSMMUG00000013266 N
ENSMMUG00000017359 Macaca mulatta ENSMMUG00000017359 N
ENSMMUG00000018606 Macaca mulatta ENSMMUG00000018606 N
ENSMMUG00000019832 Macaca mulatta ENSMMUG00000019832 N
ENSMMUP00000017448 Macaca fascicularis ENSMMUP00000017448 N
ENSMMUP00000022848 Macaca fascicularis ENSMMUP00000022848 N
ENSMMUP00000039817 Macaca fascicularis ENSMMUP00000039817 N
ENSMODG00000004606 Monodelphis domestica ENSMODG00000004606 N
ENSMODG00000009238 Monodelphis domestica ENSMODG00000009238 N
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N
ENSMPUG00000020113 Mustela putorius furo ENSMPUG00000020113 N
ENSOARG00000005357 Ovis aries ENSOARG00000005357 N
ENSOARG00000005773 Ovis aries ENSOARG00000005773 N
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N
ENSOARG00000011611 Ovis aries ENSOARG00000011611 N
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N
ENSOARG00000017078 Ovis aries ENSOARG00000017078 N
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N
ENSOCUG00000016030 Oryctolagus cuniculus ENSOCUG00000016030 N
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N
ENSOCUG00000023449 Oryctolagus cuniculus ENSOCUG00000023449 N
ENSOCUG00000027747 Oryctolagus cuniculus ENSOCUG00000027747 N
ENSOGAG00000010941 Otolemur garnettii ENSOGAG00000010941 N
ENSOGAG00000027410 Otolemur garnettii ENSOGAG00000027410 N
ENSOGAG00000028007 Otolemur garnettii ENSOGAG00000028007 N
ENSOGAG00000028411 Otolemur garnettii ENSOGAG00000028411 N
ENSOGAG00000029748 Otolemur garnettii ENSOGAG00000029748 N
ENSOGAG00000030052 Otolemur garnettii ENSOGAG00000030052 N
ENSOGAG00000030563 Otolemur garnettii ENSOGAG00000030563 N
ENSOGAG00000031959 Otolemur garnettii ENSOGAG00000031959 N
ENSOGAG00000032147 Otolemur garnettii ENSOGAG00000032147 N
ENSOGAG00000032152 Otolemur garnettii ENSOGAG00000032152 N
ENSOGAG00000032240 Otolemur garnettii ENSOGAG00000032240 N
ENSOGAG00000032325 Otolemur garnettii ENSOGAG00000032325 N
ENSOGAG00000033253 Otolemur garnettii ENSOGAG00000033253 N
ENSOGAG00000033437 Otolemur garnettii ENSOGAG00000033437 N
ENSOGAG00000034801 Otolemur garnettii ENSOGAG00000034801 N
ENSONIG00000005505 Oreochromis niloticus ENSONIG00000005505 N
ENSPANG00000005029 Papio anubis ENSPANG00000005029 N
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N
ENSPANG00000010595 Papio anubis ENSPANG00000010595 N
ENSPANG00000011105 Papio anubis ENSPANG00000011105 N
ENSPANG00000011772 Papio anubis ENSPANG00000011772 N
ENSPFOG00000004533 Poecilia formosa ENSPFOG00000004533 N
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N
ENSPPYG00000011668 Pongo abelii ENSPPYG00000011668 N
ENSPTRG00000013662 Pan troglodytes ENSPTRG00000013662 N
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N
ENSSTOG00000000443 Ictidomys tridecemlineatus ENSSTOG00000000443 N
ENSSTOG00000007009 Ictidomys tridecemlineatus ENSSTOG00000007009 N
ENSSTOG00000012404 Ictidomys tridecemlineatus ENSSTOG00000012404 N
ENSTBEG00000005874 Tupaia belangeri ENSTBEG00000005874 N
ENSTBEG00000009427 Tupaia belangeri ENSTBEG00000009427 N
ENSTBEG00000012989 Tupaia belangeri ENSTBEG00000012989 N
ENSTBEG00000013995 Tupaia belangeri ENSTBEG00000013995 N
ENSTBEG00000014925 Tupaia belangeri ENSTBEG00000014925 N
ENSTBEG00000015340 Tupaia belangeri ENSTBEG00000015340 N
ENSTBEG00000015758 Tupaia belangeri ENSTBEG00000015758 N
ENSTBEG00000016187 Tupaia belangeri ENSTBEG00000016187 N
ENSTBEG00000017117 Tupaia belangeri ENSTBEG00000017117 N
ENSTGUG00000006267 Taeniopygia guttata ENSTGUG00000006267 N
ENSTSYG00000003868 Tarsius syrichta ENSTSYG00000003868 N
ENSTSYG00000012587 Tarsius syrichta ENSTSYG00000012587 N
ENSXMAG00000006844 Xiphophorus maculatus ENSXMAG00000006844 N
Gfo_R010508 Geospiza fortis Gfo_R010508 N
Hmg1l1 Rattus norvegicus ENSRNOG00000034130 N
Hmg1l1 Rattus norvegicus ENSRNOG00000051482 N
HMGB1 Bos taurus ENSBTAG00000014862 N
HMGB1 Microcebus murinus ENSMICG00000006213 N
HMGB1 Monodelphis domestica ENSMODG00000004443 N
HMGB1 Tupaia belangeri ENSTBEG00000013046 N
Hmgb1-ps3 Rattus norvegicus ENSRNOG00000032420 N
hmgb1a Danio rerio ENSDARG00000099175 N
hmgb1a Oryzias latipes ENSORLG00000003400 N
hmgb1a Tetraodon nigroviridis ENSTNIG00000009909 N
hmgb1a Takifugu rubripes ENSTRUG00000008452 N
hmgb1b Gasterosteus aculeatus ENSGACG00000011447 N
hmgb1b Takifugu rubripes ENSTRUG00000004822 N
HMGB2 Macaca mulatta ENSMMUG00000020008 N
HMGB2 Ornithorhynchus anatinus ENSOANG00000029120 N
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N
HMGB2 Sus scrofa ENSSSCG00000009704 N
hmgb2.S Xenopus laevis XB-GENE-1000251 N
hmgb2a Danio rerio ENSDARG00000029722 N
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N
HMGB3 Oryctolagus cuniculus ENSOCUG00000024959 N
LOC100911637 Rattus norvegicus ENSRNOG00000048094 N
LOC100911637 Rattus norvegicus ENSRNOG00000048471 N
LOC108350839 Rattus norvegicus ENSRNOG00000038437 N
LOC688583 Rattus norvegicus ENSRNOG00000050910 N
Myotis_brandtii_Hmgb1_10003213 Myotis brandtii Myotis_brandtii_Hmgb1_10003213 N
Myotis_brandtii_Hmgb1_10026956 Myotis brandtii Myotis_brandtii_Hmgb1_10026956 N
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N
Myotis_brandtii_HMGB3_10026974 Myotis brandtii Myotis_brandtii_HMGB3_10026974 N
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N
RGD1563668 Rattus norvegicus ENSRNOG00000038478 N