Gorai.010G243500 (Gossypium raimondii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Gorai.010G243500 T228795_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00 		Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432 		0.839 0.877
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.010G243500.1 Homeodomain 28 84
Gorai.010G243500.2 Homeodomain 28 84
Gorai.010G243500.3 Homeodomain 28 84
Gorai.010G243500.4 Homeodomain 28 84

Links

Other Homeodomain family TFs
Other Gossypium raimondii TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0019s00470 Populus trichocarpa POPTR_0019s00470 N
POPTR_0019s00510 Populus trichocarpa POPTR_0019s00510 N
POPTR_0019s00540 Populus trichocarpa POPTR_0019s00540 N
POPTR_0031s00230 Populus trichocarpa POPTR_0031s00230 N
POPTR_0031s00430 Populus trichocarpa POPTR_0031s00430 N
SapurV1A.1086s0080 Salix purpurea SapurV1A.1086s0080 N