Phatr3_J45559 (Phaeodactylum tricornutum)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 Phatr3_J45559 T241716_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFA6B
M06941_2.00 		Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a 		0.354 0.326
HSFA6B
M06942_2.00 		Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_col 		0.354 0.326
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Phatr3_J45559.p1 HSF 100 201

Links

Other HSF family TFs
Other Phaeodactylum tricornutum TFs

258 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOC_0000909601 Angiostrongylus costaricensis ACOC_0000909601 N
ALUE_0000006201 Ascaris lumbricoides ALUE_0000006201 N
ASIM_0001061401 Anisakis simplex ASIM_0001061401 N
ASU_13814 Ascaris suum ASU_13814 N
Bm4196 Brugia malayi Bm4196 N
BTMF_0001047601 Brugia timori BTMF_0001047601 N
BTMF_0001685601 Brugia timori BTMF_0001685601 N
CBG14076 Caenorhabditis briggsae CBG14076 N
CBN28426 Caenorhabditis brenneri CBN28426 N
CJA16887 Caenorhabditis japonica CJA16887 N
CRE00936 Caenorhabditis remanei CRE00936 N
DICVIV_06612 Dictyocaulus viviparus DICVIV_06612 N
EVEC_0001355301 Enterobius vermicularis EVEC_0001355301 N
HPLM_0000886801 Haemonchus placei HPLM_0000886801 N
L596_g148 Steinernema carpocapsae L596_g148 N
L889_g31190 Steinernema feltiae L889_g31190 N
L892_g12859 Steinernema scapterisci L892_g12859 N
L893_g14515 Steinernema glaseri L893_g14515 N
L898_g33187 Steinernema monticolum L898_g33187 N
LOAG_16508 Loa loa LOAG_16508 N
maker-nMf.1.1.scaf01187-augustus-gene-0.14 Meloidogyne floridensis maker-nMf.1.1.scaf01187-augustus-gene-0.14 N
nAv.1.0.1.g08576 Acanthocheilonema viteae nAv.1.0.1.g08576 N
nDi.2.2.2.g00913 Dirofilaria immitis nDi.2.2.2.g00913 N
nLs.2.1.2.g06387 Litomosoides sigmodontis nLs.2.1.2.g06387 N
nOo.2.0.1.g07401 Onchocerca ochengi nOo.2.0.1.g07401 N
npax-2 Caenorhabditis elegans WBGene00018591 N
OFLC_0000734201 Onchocerca flexuosa OFLC_0000734201 N
Ppa-npax-4 Pristionchus pacificus PPA03062 N
PTRK_0001095200 Parastrongyloides trichosuri PTRK_0001095200 N
RSKR_0000509700 Rhabditophanes kr3021 RSKR_0000509700 N
scaffold1066-EXSNAP2012.3 Pristionchus exspectatus scaffold1066-EXSNAP2012.3 N
SMUV_0000429701 Syphacia muris SMUV_0000429701 N
SPAL_0000243500 Strongyloides papillosus SPAL_0000243500 N
SVE_0001100 Strongyloides venezuelensis SVE_0001100 N
TCLT_0000997101 Thelazia callipaeda TCLT_0000997101 N
TCNE_0000151101 Toxocara canis TCNE_0000151101 N
TCNE_0000252101 Toxocara canis TCNE_0000252101 N
WBGene00239907 Onchocerca volvulus WBGene00239907 N
WUBG_05014 Wuchereria bancrofti WUBG_05014 N