CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ppa-npax-4
(
Pristionchus pacificus
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00292 (PAX)
IPR001523
PPA03062
T312032_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA03062
Paired box
1
103
MKEREYIVSLFQNGWKICDISRKLCVTHSCVSKILNRYRTTGSVKPKEAKEGRTESPLVAAIRDYRARLGMSRQSEIREQLIADGICTRDNAPSRSSINHILR
Links
Other
Paired box
family TFs
Other
Pristionchus pacificus
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold1066-EXSNAP2012.3
Pristionchus exspectatus
scaffold1066-EXSNAP2012.3
N
0.990
CBN28426
Caenorhabditis brenneri
CBN28426
N
0.874
CJA16887
Caenorhabditis japonica
CJA16887
N
0.874
CRE00936
Caenorhabditis remanei
CRE00936
N
0.874
nDi.2.2.2.g00913
Dirofilaria immitis
nDi.2.2.2.g00913
N
0.874
CBG14076
Caenorhabditis briggsae
CBG14076
N
0.864
WBGene00239907
Onchocerca volvulus
WBGene00239907
N
0.864
ASU_13814
Ascaris suum
ASU_13814
N
0.864
ASIM_0001061401
Anisakis simplex
ASIM_0001061401
N
0.835
nOo.2.0.1.g07401
Onchocerca ochengi
nOo.2.0.1.g07401
N
0.835
TCLT_0000997101
Thelazia callipaeda
TCLT_0000997101
N
0.835
TCNE_0000252101
Toxocara canis
TCNE_0000252101
N
0.835
nLs.2.1.2.g06387
Litomosoides sigmodontis
nLs.2.1.2.g06387
N
0.825
ACOC_0000909601
Angiostrongylus costaricensis
ACOC_0000909601
N
0.816
SMUV_0000429701
Syphacia muris
SMUV_0000429701
N
0.816
NBR_0000487701
Nippostrongylus brasiliensis
NBR_0000487701
N
0.810
NECAME_03708
Necator americanus
NECAME_03708
N
0.798
maker-nMf.1.1.scaf01187-augustus-gene-0.14
Meloidogyne floridensis
maker-nMf.1.1.scaf01187-augustus-gene-0.14
N
0.796
TCNE_0000151101
Toxocara canis
TCNE_0000151101
N
0.796
PTRK_0001095200
Parastrongyloides trichosuri
PTRK_0001095200
N
0.757
SPAL_0000243500
Strongyloides papillosus
SPAL_0000243500
N
0.757
SSTP_0000993700
Strongyloides stercoralis
SSTP_0000993700
N
0.757
L898_g33187
Steinernema monticolum
L898_g33187
N
0.748
GPLIN_001118300
Globodera pallida
GPLIN_001118300
N
0.738
L596_g148
Steinernema carpocapsae
L596_g148
N
0.738
L889_g31190
Steinernema feltiae
L889_g31190
N
0.738
L892_g12859
Steinernema scapterisci
L892_g12859
N
0.738
L893_g14515
Steinernema glaseri
L893_g14515
N
0.738
Bm4196
Brugia malayi
Bm4196
N
0.730
npax-2
Caenorhabditis elegans
WBGene00018591
N
0.730
ANCCEY_02227
Ancylostoma ceylanicum
ANCCEY_02227
N
0.718
WUBG_05014
Wuchereria bancrofti
WUBG_05014
N
0.714
nAv.1.0.1.g08576
Acanthocheilonema viteae
nAv.1.0.1.g08576
N
0.714
LOAG_16508
Loa loa
LOAG_16508
N
0.706
EVEC_0001355301
Enterobius vermicularis
EVEC_0001355301
N
0.705