CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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npax-2
(
Caenorhabditis elegans
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00292 (PAX)
IPR001523
WBGene00018591
T312113_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
F48B9.5
Paired box
97
218
RSSGRNQLGRTYSPGLPLSMCEREEIVKLFQGGWKICDISKRLCVTHSCVSKILNRYRQTGSVKPKDAKEGRTESPLVLAVRDYRSRLGMCRQSEIREQLIRDGVCTRDNAPSRSSINHILR
Links
Other
Paired box
family TFs
Other
Caenorhabditis elegans
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CJA16887
Caenorhabditis japonica
CJA16887
N
0.992
CRE00936
Caenorhabditis remanei
CRE00936
N
0.992
CBG14076
Caenorhabditis briggsae
CBG14076
N
0.975
CBN28426
Caenorhabditis brenneri
CBN28426
N
0.975
NBR_0000487701
Nippostrongylus brasiliensis
NBR_0000487701
N
0.897
DICVIV_06612
Dictyocaulus viviparus
DICVIV_06612
N
0.885
HPLM_0000886801
Haemonchus placei
HPLM_0000886801
N
0.885
ACOC_0000909601
Angiostrongylus costaricensis
ACOC_0000909601
N
0.861
Bm4196
Brugia malayi
Bm4196
N
0.852
ASU_13814
Ascaris suum
ASU_13814
N
0.852
WBGene00239907
Onchocerca volvulus
WBGene00239907
N
0.844
EVEC_0001355301
Enterobius vermicularis
EVEC_0001355301
N
0.844
nDi.2.2.2.g00913
Dirofilaria immitis
nDi.2.2.2.g00913
N
0.844
nAv.1.0.1.g08576
Acanthocheilonema viteae
nAv.1.0.1.g08576
N
0.832
NECAME_03708
Necator americanus
NECAME_03708
N
0.830
ASIM_0001061401
Anisakis simplex
ASIM_0001061401
N
0.828
SMUV_0000429701
Syphacia muris
SMUV_0000429701
N
0.828
WUBG_05014
Wuchereria bancrofti
WUBG_05014
N
0.820
maker-nMf.1.1.scaf01187-augustus-gene-0.14
Meloidogyne floridensis
maker-nMf.1.1.scaf01187-augustus-gene-0.14
N
0.820
nOo.2.0.1.g07401
Onchocerca ochengi
nOo.2.0.1.g07401
N
0.820
TCLT_0000997101
Thelazia callipaeda
TCLT_0000997101
N
0.820
LOAG_16508
Loa loa
LOAG_16508
N
0.811
nLs.2.1.2.g06387
Litomosoides sigmodontis
nLs.2.1.2.g06387
N
0.803
BTMF_0001047601
Brugia timori
BTMF_0001047601
N
0.800
GPLIN_001118300
Globodera pallida
GPLIN_001118300
N
0.779
TCNE_0000151101
Toxocara canis
TCNE_0000151101
N
0.770
BXY_0116700
Bursaphelenchus xylophilus
BXY_0116700
N
0.754
L898_g33187
Steinernema monticolum
L898_g33187
N
0.754
RSKR_0000509700
Rhabditophanes kr3021
RSKR_0000509700
N
0.754
SVE_0001100
Strongyloides venezuelensis
SVE_0001100
N
0.754
L596_g148
Steinernema carpocapsae
L596_g148
N
0.746
L889_g31190
Steinernema feltiae
L889_g31190
N
0.746
L892_g12859
Steinernema scapterisci
L892_g12859
N
0.746
L893_g14515
Steinernema glaseri
L893_g14515
N
0.746
PTRK_0001095200
Parastrongyloides trichosuri
PTRK_0001095200
N
0.746
SPAL_0000243500
Strongyloides papillosus
SPAL_0000243500
N
0.746
SSTP_0000993700
Strongyloides stercoralis
SSTP_0000993700
N
0.746
Ppa-npax-4
Pristionchus pacificus
PPA03062
N
0.730
scaffold1066-EXSNAP2012.3
Pristionchus exspectatus
scaffold1066-EXSNAP2012.3
N
0.721