CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NBR_0000487701
(
Nippostrongylus brasiliensis
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
NBR_0000487701
T312801_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0000487701-mRNA-1
Paired box
1
58
MTLQAGWKICDISKRLCVTHSCVSKILNRYRQTGSVRPKDAKEGRTESPLVTAVRDYR
Links
Other
Paired box
family TFs
Other
Nippostrongylus brasiliensis
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HCOI00419700
Haemonchus contortus
HCOI00419700
N
0.948
HPLM_0000886801
Haemonchus placei
HPLM_0000886801
N
0.948
ANCCEY_02227
Ancylostoma ceylanicum
ANCCEY_02227
N
0.931
CBG14076
Caenorhabditis briggsae
CBG14076
N
0.914
ACOC_0000909601
Angiostrongylus costaricensis
ACOC_0000909601
N
0.914
CBN28426
Caenorhabditis brenneri
CBN28426
N
0.897
CJA16887
Caenorhabditis japonica
CJA16887
N
0.897
CRE00936
Caenorhabditis remanei
CRE00936
N
0.897
npax-2
Caenorhabditis elegans
WBGene00018591
N
0.897
ASIM_0001061401
Anisakis simplex
ASIM_0001061401
N
0.862
WUBG_05014
Wuchereria bancrofti
WUBG_05014
N
0.845
Bm4196
Brugia malayi
Bm4196
N
0.845
LOAG_16508
Loa loa
LOAG_16508
N
0.845
WBGene00239907
Onchocerca volvulus
WBGene00239907
N
0.845
ASU_13814
Ascaris suum
ASU_13814
N
0.845
EVEC_0001355301
Enterobius vermicularis
EVEC_0001355301
N
0.845
nOo.2.0.1.g07401
Onchocerca ochengi
nOo.2.0.1.g07401
N
0.845
TCLT_0000997101
Thelazia callipaeda
TCLT_0000997101
N
0.845
TCNE_0000252101
Toxocara canis
TCNE_0000252101
N
0.845
nDi.2.2.2.g00913
Dirofilaria immitis
nDi.2.2.2.g00913
N
0.828
nLs.2.1.2.g06387
Litomosoides sigmodontis
nLs.2.1.2.g06387
N
0.828
Ppa-npax-4
Pristionchus pacificus
PPA03062
N
0.810
scaffold1066-EXSNAP2012.3
Pristionchus exspectatus
scaffold1066-EXSNAP2012.3
N
0.810
SMUV_0000429701
Syphacia muris
SMUV_0000429701
N
0.810
BXY_0116700
Bursaphelenchus xylophilus
BXY_0116700
N
0.793
maker-nMf.1.1.scaf01187-augustus-gene-0.14
Meloidogyne floridensis
maker-nMf.1.1.scaf01187-augustus-gene-0.14
N
0.793
TCNE_0000151101
Toxocara canis
TCNE_0000151101
N
0.793
GPLIN_001118300
Globodera pallida
GPLIN_001118300
N
0.707