irf4a (Tetraodon nigroviridis)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSTNIG00000005370 T244419_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		0.895 0.895
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		0.895 0.895
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		0.895 0.895
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		0.895 0.895
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		0.895 0.895
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		0.895 0.895
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		0.895 0.895
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		0.895 0.895
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		0.895 0.895
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		0.895 0.895
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		0.895 0.895
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.886 0.886
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.886 0.886
IRF8
M03335_2.00 		Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_1 		0.790 0.790
IRF8
M03336_2.00 		Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_2 		0.790 0.790
IRF8
M05541_2.00 		Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX 		0.790 0.790
IRF8
M05543_2.00 		Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN		 SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX 		0.790 0.790
IRF8
M09236_2.00 		Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B 		0.790 0.790
IRF8
M10890_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ICSBP_Q6 		0.790 0.790
IRF8
M10891_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF8_Q6 		0.790 0.790
IRF8
M05542_2.00 		Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX 		0.790 0.790
IRF8
M05544_2.00 		Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX 		0.790 0.790
Irf8
M09246_2.00 		Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A 		0.781 0.781
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000004386 IRF 17 122
ENSTNIP00000008053 IRF 17 122

Links

Other IRF family TFs
Other Tetraodon nigroviridis TFs

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R009222 Calypte anna Aan_R009222 I 0.788
Aan_R012662 Calypte anna Aan_R012662 I 0.895
Aan_R015695 Calypte anna Aan_R015695 I 0.772
Afo_R010468 Aptenodytes forsteri Afo_R010468 I 0.772
Afo_R011419 Aptenodytes forsteri Afo_R011419 I 0.788
Afo_R014746 Aptenodytes forsteri Afo_R014746 I 0.895
Alligator_sinensis_CCG008430.1 Alligator sinensis Alligator_sinensis_CCG008430.1 I 0.788
Alligator_sinensis_CCG015622.1 Alligator sinensis Alligator_sinensis_CCG015622.1 I 0.895
Brh_R000433 Buceros rhinoceros Brh_R000433 I 0.886
Brh_R009589 Buceros rhinoceros Brh_R009589 I 0.788
Cmyd_10009547 Chelonia mydas Cmyd_10009547 I 0.724
Cmyd_10011521 Chelonia mydas Cmyd_10011521 I 0.895
Cmyd_10021085 Chelonia mydas Cmyd_10021085 I 0.798
ENSAMEG00000005976 Ailuropoda melanoleuca ENSAMEG00000005976 I 0.895
ENSAMEG00000018268 Ailuropoda melanoleuca ENSAMEG00000018268 I 0.798
ENSAMXG00000002697 Astyanax mexicanus ENSAMXG00000002697 I 0.743
ENSAMXG00000003452 Astyanax mexicanus ENSAMXG00000003452 I 0.731
ENSAMXG00000006093 Astyanax mexicanus ENSAMXG00000006093 I 0.848
ENSAMXG00000012775 Astyanax mexicanus ENSAMXG00000012775 I 0.790
ENSAMXG00000016370 Astyanax mexicanus ENSAMXG00000016370 I 0.895
ENSAPLG00000014646 Anas platyrhynchos ENSAPLG00000014646 I 0.895
ENSCPOG00000027266 Cavia porcellus ENSCPOG00000027266 I 0.788
ENSCSAG00000003142 Chlorocebus sabaeus ENSCSAG00000003142 I 0.798
ENSCSAG00000007164 Chlorocebus sabaeus ENSCSAG00000007164 I 0.895
ENSFALG00000005506 Ficedula albicollis ENSFALG00000005506 I 0.733
ENSFALG00000006647 Ficedula albicollis ENSFALG00000006647 I 0.779
ENSFALG00000013071 Ficedula albicollis ENSFALG00000013071 I 0.895
ENSGALG00000006448 Gallus gallus ENSGALG00000006448 I 0.724
ENSGALG00000012830 Gallus gallus ENSGALG00000012830 I 0.895
ENSGMOG00000003945 Gadus morhua ENSGMOG00000003945 I 0.712
ENSGMOG00000005047 Gadus morhua ENSGMOG00000005047 I 0.914
ENSGMOG00000016994 Gadus morhua ENSGMOG00000016994 I 0.867
ENSLACG00000004633 Latimeria chalumnae ENSLACG00000004633 I 0.712
ENSLACG00000005859 Latimeria chalumnae ENSLACG00000005859 I 0.740
ENSLACG00000007228 Latimeria chalumnae ENSLACG00000007228 I 0.781
ENSLOCG00000001013 Lepisosteus oculatus ENSLOCG00000001013 I 0.769
ENSLOCG00000003532 Lepisosteus oculatus ENSLOCG00000003532 I 0.771
ENSLOCG00000013008 Lepisosteus oculatus ENSLOCG00000013008 I 0.886
ENSMEUG00000002440 Macropus eugenii ENSMEUG00000002440 I 0.886
ENSMICG00000011721 Microcebus murinus ENSMICG00000011721 I 0.875
ENSMICG00000012090 Microcebus murinus ENSMICG00000012090 I 0.796
ENSMODG00000019483 Monodelphis domestica ENSMODG00000019483 I 0.714
ENSMPUG00000007848 Mustela putorius furo ENSMPUG00000007848 I 0.895
ENSMPUG00000008641 Mustela putorius furo ENSMPUG00000008641 I 0.788
ENSNLEG00000010631 Nomascus leucogenys ENSNLEG00000010631 I 0.895
ENSNLEG00000011429 Nomascus leucogenys ENSNLEG00000011429 I 0.798
ENSOARG00000003822 Ovis aries ENSOARG00000003822 I 0.895
ENSOARG00000011513 Ovis aries ENSOARG00000011513 I 0.788
ENSONIG00000005631 Oreochromis niloticus ENSONIG00000005631 I 0.731
ENSONIG00000006398 Oreochromis niloticus ENSONIG00000006398 I 0.857
ENSONIG00000009637 Oreochromis niloticus ENSONIG00000009637 I 0.933
ENSP00000268638 Macaca fascicularis ENSP00000268638 I 0.798
ENSP00000268638-D1 Bos grunniens ENSP00000268638-D1 I 0.788
ENSP00000370343 Macaca fascicularis ENSP00000370343 I 0.881
ENSP00000370343-D1 Bos grunniens ENSP00000370343-D1 I 0.895
ENSPANG00000023389 Papio anubis ENSPANG00000023389 I 0.860
ENSPANG00000024770 Papio anubis ENSPANG00000024770 I 0.798
ENSPFOG00000000657 Poecilia formosa ENSPFOG00000000657 I 0.857
ENSPFOG00000015506 Poecilia formosa ENSPFOG00000015506 I 0.924
ENSPFOG00000017639 Poecilia formosa ENSPFOG00000017639 I 0.721
ENSPPYG00000007620 Pongo abelii ENSPPYG00000007620 I 0.798
ENSPPYG00000016161 Pongo abelii ENSPPYG00000016161 I 0.895
ENSPSIG00000003518 Pelodiscus sinensis ENSPSIG00000003518 I 0.750
ENSPSIG00000011619 Pelodiscus sinensis ENSPSIG00000011619 I 0.895
ENSPSIG00000011788 Pelodiscus sinensis ENSPSIG00000011788 I 0.798
ENSSHAG00000006901 Sarcophilus harrisii ENSSHAG00000006901 I 0.798
ENSSHAG00000015592 Sarcophilus harrisii ENSSHAG00000015592 I 0.886
ENSSSCG00000022547 Sus scrofa ENSSSCG00000022547 I 0.737
ENSSTOG00000011470 Ictidomys tridecemlineatus ENSSTOG00000011470 I 0.895
ENSSTOG00000028363 Ictidomys tridecemlineatus ENSSTOG00000028363 I 0.788
ENSTGUG00000006609 Taeniopygia guttata ENSTGUG00000006609 I 0.733
ENSTSYG00000006495 Tarsius syrichta ENSTSYG00000006495 I 0.875
ENSXMAG00000003082 Xiphophorus maculatus ENSXMAG00000003082 I 0.731
ENSXMAG00000006246 Xiphophorus maculatus ENSXMAG00000006246 I 0.857
ENSXMAG00000017015 Xiphophorus maculatus ENSXMAG00000017015 I 0.924
Gfo_R000501 Geospiza fortis Gfo_R000501 I 0.779
Gfo_R003357 Geospiza fortis Gfo_R003357 I 0.895
Gfo_R005312 Geospiza fortis Gfo_R005312 I 0.772
irf10 Danio rerio ENSDARG00000027658 I 0.781
IRF4 Anolis carolinensis ENSACAG00000017711 I 0.886
IRF4 Bos taurus ENSBTAG00000002929 I 0.895
IRF4 Choloepus hoffmanni ENSCHOG00000012417 I 0.875
IRF4 Callithrix jacchus ENSCJAG00000019524 I 0.895
IRF4 Cavia porcellus ENSCPOG00000003562 I 0.895
Irf4 Dipodomys ordii ENSDORG00000014895 I 0.895
IRF4 Equus caballus ENSECAG00000016808 I 0.895
IRF4 Erinaceus europaeus ENSEEUG00000007703 I 0.898
IRF4 Echinops telfairi ENSETEG00000018472 I 0.895
IRF4 Felis catus ENSFCAG00000022941 I 0.895
IRF4 Homo sapiens ENSG00000137265 D 0.895
IRF4 Gorilla gorilla ENSGGOG00000012342 I 0.895
IRF4 Loxodonta africana ENSLAFG00000017235 I 0.895
IRF4 Myotis lucifugus ENSMLUG00000010058 I 0.895
IRF4 Macaca mulatta ENSMMUG00000018513 I 0.895
IRF4 Monodelphis domestica ENSMODG00000008383 I 0.886
Irf4 Mus musculus ENSMUSG00000021356 D 0.886
IRF4 Ornithorhynchus anatinus ENSOANG00000006326 I 0.820
IRF4 Oryctolagus cuniculus ENSOCUG00000009374 I 0.876
IRF4 Otolemur garnettii ENSOGAG00000014574 I 0.895
IRF4 Ochotona princeps ENSOPRG00000012683 I 0.895
IRF4 Procavia capensis ENSPCAG00000010586 I 0.918
IRF4 Pan troglodytes ENSPTRG00000017656 I 0.895
IRF4 Pteropus vampyrus ENSPVAG00000005078 I 0.895
Irf4 Rattus norvegicus ENSRNOG00000061070 I 0.886
IRF4 Tupaia belangeri ENSTBEG00000012240 I 0.895
IRF4 Taeniopygia guttata ENSTGUG00000002144 I 0.895
IRF4 Tursiops truncatus ENSTTRG00000001849 I 0.905
irf4 Xenopus tropicalis XB-GENE-988321 I 0.895
irf4a Danio rerio ENSDARG00000006560 I 0.867
irf4a Gasterosteus aculeatus ENSGACG00000016461 I 0.895
irf4a Oryzias latipes ENSORLG00000017242 I 0.924
irf4a Takifugu rubripes ENSTRUG00000011568 I 0.952
irf4b Danio rerio ENSDARG00000055374 I 0.857
irf4b Gasterosteus aculeatus ENSGACG00000004966 I 0.857
irf4b Oryzias latipes ENSORLG00000012712 I 0.867
irf4b Tetraodon nigroviridis ENSTNIG00000008222 I 0.838
irf4b Takifugu rubripes ENSTRUG00000002946 I 0.857
IRF8 Anolis carolinensis ENSACAG00000005409 I 0.779
IRF8 Bos taurus ENSBTAG00000017824 I 0.788
IRF8 Canis familiaris ENSCAFG00000019919 I 0.798
IRF8 Callithrix jacchus ENSCJAG00000017331 I 0.788
irf8 Danio rerio ENSDARG00000056407 I 0.721
IRF8 Dasypus novemcinctus ENSDNOG00000038898 I 0.798
IRF8 Equus caballus ENSECAG00000015449 I 0.746
IRF8 Erinaceus europaeus ENSEEUG00000002644 I 0.779
IRF8 Felis catus ENSFCAG00000007615 I 0.798
IRF8 Homo sapiens ENSG00000140968 D 0.821
irf8 Gasterosteus aculeatus ENSGACG00000015958 I 0.721
IRF8 Gallus gallus ENSGALG00000005757 I 0.788
IRF8 Gorilla gorilla ENSGGOG00000028251 I 0.798
IRF8 Loxodonta africana ENSLAFG00000010973 I 0.798
IRF8 Myotis lucifugus ENSMLUG00000005109 I 0.798
IRF8 Macaca mulatta ENSMMUG00000008125 I 0.798
IRF8 Monodelphis domestica ENSMODG00000004572 I 0.798
Irf8 Mus musculus ENSMUSG00000041515 D 0.788
IRF8 Ornithorhynchus anatinus ENSOANG00000003741 I 0.788
IRF8 Oryctolagus cuniculus ENSOCUG00000000536 I 0.798
IRF8 Otolemur garnettii ENSOGAG00000009262 I 0.788
IRF8 Ochotona princeps ENSOPRG00000002139 I 0.788
irf8 Oryzias latipes ENSORLG00000018216 I 0.731
IRF8 Procavia capensis ENSPCAG00000004460 I 0.798
IRF8 Pan troglodytes ENSPTRG00000008435 I 0.798
IRF8 Pteropus vampyrus ENSPVAG00000003758 I 0.798
Irf8 Rattus norvegicus ENSRNOG00000017869 I 0.779
IRF8 Tupaia belangeri ENSTBEG00000013828 I 0.769
irf8 Tetraodon nigroviridis ENSTNIG00000009283 I 0.714
irf8 Takifugu rubripes ENSTRUG00000018213 I 0.721
IRF8 Tursiops truncatus ENSTTRG00000016024 I 0.800
IRF8 Vicugna pacos ENSVPAG00000006643 I 0.796
irf8.L Xenopus laevis XB-GENE-985949 I 0.760
Myotis_brandtii_Irf4_10020370 Myotis brandtii Myotis_brandtii_Irf4_10020370 I 0.883
Myotis_brandtii_IRF8_10035313 Myotis brandtii Myotis_brandtii_IRF8_10035313 I 0.798
Ogr05775 Ophisaurus gracilis Ogr05775 I 0.886
Ogr08841 Ophisaurus gracilis Ogr08841 I 0.755
Pvit_05673 Pogona vitticeps Pvit_05673 I 0.886
Pvit_16863 Pogona vitticeps Pvit_16863 I 0.779
Tal_R007108 Tyto alba Tal_R007108 I 0.788
Tal_R010571 Tyto alba Tal_R010571 I 0.862
XP_002934991 Xenopus tropicalis XP_002934991 I 0.800