Afo_R001981 (Aptenodytes forsteri)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00605 (IRF) IPR001346 Afo_R001981 T244499_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF6
M02254_2.00 		Meleagris gallopavo
NRNCGAWACY
RGTWTCGNYN		 PBM
Weirauch et al.(2014)
pTH9210 		0.990 0.990
IRF6
M02253_2.00 		Gallus gallus
NNMCNAAWNN
NNWTTNGKNN		 PBM
Weirauch et al.(2014)
pTH9178 		0.981 0.981
irf6.2
M02259_2.00 		Xenopus tropicalis
NVNHGAWACH
DGTWTCDNBN		 PBM
Weirauch et al.(2014)
pTH9302 		0.962 0.962
Irf6
M00176_2.00 		Mus musculus
NNNHGADASN
NSTHTCDNNN		 PBM
Badis et al.(2009)
Irf6_3803 		0.933 0.933
IRF6
M05527_2.00 		Homo sapiens
RGTWTCGNNNNNNYGAWACY
RGTWTCRNNNNNNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_HT-SELEX 		0.933 0.933
IRF6
M05529_2.00 		Homo sapiens
ACCGAAACT
AGTTTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_HT-SELEX 		0.933 0.933
IRF6
M05528_2.00 		Homo sapiens
RGTWTCGNHNNDNYGAWACY
RGTWTCRNHNNDNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_Methyl-HT-SELEX 		0.933 0.933
IRF6
M05530_2.00 		Homo sapiens
ACCGAWACY
RGTWTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_Methyl-HT-SELEX 		0.933 0.933
irf5.L
M02260_2.00 		Xenopus laevis
VNCGADACHN
NDGTHTCGNB		 PBM
Weirauch et al.(2014)
pTH9367 		0.781 0.781
Irf5
M00177_2.00 		Mus musculus
NNNHGADASH
DSTHTCDNNN		 PBM
Badis et al.(2009)
Irf5_3874 		0.724 0.724
IRF5
M03332_2.00 		Homo sapiens
YCGAAACCGAAMCY
RGKTTCGGTTTCGR		 SELEX
Jolma et al.(2013)
IRF5_1 		0.724 0.724
IRF5
M03333_2.00 		Homo sapiens
HACCGAAACYV
BRGTTTCGGTD		 SELEX
Jolma et al.(2013)
IRF5_2 		0.724 0.724
IRF5
M05535_2.00 		Homo sapiens
NCGAAACCGAWACH
DGTWTCGGTTTCGN		 SELEX
Yin et al.(2017)
IRF5_eDBD_HT-SELEX 		0.724 0.724
IRF5
M05537_2.00 		Homo sapiens
NCGAAACCGAAACY
RGTTTCGGTTTCGN		 SELEX
Yin et al.(2017)
IRF5_FL_HT-SELEX 		0.724 0.724
IRF5
M10884_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF5_Q3 		0.724 0.724
IRF5
M05536_2.00 		Homo sapiens
NYGAWACYGAWACH
DGTWTCRGTWTCRN		 SELEX
Yin et al.(2017)
IRF5_eDBD_Methyl-HT-SELEX 		0.724 0.724
IRF5
M05538_2.00 		Homo sapiens
NYGAAACCGAWACY
RGTWTCGGTTTCRN		 SELEX
Yin et al.(2017)
IRF5_FL_Methyl-HT-SELEX 		0.724 0.724
IRF5
M02256_2.00 		Oryctolagus cuniculus
NHCGAAACYN
NRGTTTCGDN		 PBM
Weirauch et al.(2014)
pTH9272 		0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R001981 IRF 9 114

Links

Other IRF family TFs
Other Aptenodytes forsteri TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R013968 Aptenodytes forsteri Afo_R013968 N
Brh_R010385 Buceros rhinoceros Brh_R010385 N
ENSAMEG00000007562 Ailuropoda melanoleuca ENSAMEG00000007562 N
ENSAPLG00000012018 Anas platyrhynchos ENSAPLG00000012018 N
ENSCAFG00000023754 Canis familiaris ENSCAFG00000023754 N
ENSCHOG00000004264 Choloepus hoffmanni ENSCHOG00000004264 N
ENSCPOG00000003956 Cavia porcellus ENSCPOG00000003956 N
ENSCSAG00000001057 Chlorocebus sabaeus ENSCSAG00000001057 N
ENSDNOG00000002252 Dasypus novemcinctus ENSDNOG00000002252 N
ENSECAG00000008368 Equus caballus ENSECAG00000008368 N
ENSEEUG00000015979 Erinaceus europaeus ENSEEUG00000015979 N
ENSETEG00000001618 Echinops telfairi ENSETEG00000001618 N
ENSFALG00000000604 Ficedula albicollis ENSFALG00000000604 N
ENSFCAG00000000744 Felis catus ENSFCAG00000000744 N
ENSGGOG00000026784 Gorilla gorilla ENSGGOG00000026784 N
ENSLACG00000016238 Latimeria chalumnae ENSLACG00000016238 N
ENSLAFG00000023212 Loxodonta africana ENSLAFG00000023212 N
ENSLOCG00000000323 Lepisosteus oculatus ENSLOCG00000000323 N
ENSMGAG00000004943 Meleagris gallopavo ENSMGAG00000004943 N
ENSMLUG00000000818 Myotis lucifugus ENSMLUG00000000818 N
ENSMMUG00000019801 Macaca mulatta ENSMMUG00000019801 N
ENSMODG00000017428 Monodelphis domestica ENSMODG00000017428 N
ENSMPUG00000015225 Mustela putorius furo ENSMPUG00000015225 N
ENSOANG00000001192 Ornithorhynchus anatinus ENSOANG00000001192 N
ENSOARG00000020934 Ovis aries ENSOARG00000020934 N
ENSOCUG00000011975 Oryctolagus cuniculus ENSOCUG00000011975 N
ENSOGAG00000013012 Otolemur garnettii ENSOGAG00000013012 N
ENSOPRG00000000880 Ochotona princeps ENSOPRG00000000880 N
ENSP00000291374 Macaca fascicularis ENSP00000291374 N
ENSP00000291374-D1 Bos grunniens ENSP00000291374-D1 N
ENSPANG00000016510 Papio anubis ENSPANG00000016510 N
ENSPCAG00000013117 Procavia capensis ENSPCAG00000013117 N
ENSPPYG00000001591 Pongo abelii ENSPPYG00000001591 N
ENSPTRG00000000485 Pan troglodytes ENSPTRG00000000485 N
ENSSARG00000013492 Sorex araneus ENSSARG00000013492 N
ENSSSCG00000022120 Sus scrofa ENSSSCG00000022120 N
ENSSTOG00000027615 Ictidomys tridecemlineatus ENSSTOG00000027615 N
ENSTGUG00000001374 Taeniopygia guttata ENSTGUG00000001374 N
ENSTSYG00000007928 Tarsius syrichta ENSTSYG00000007928 N
ENSTTRG00000003694 Tursiops truncatus ENSTTRG00000003694 N
Gfo_R011647 Geospiza fortis Gfo_R011647 N
Myotis_brandtii_ZBTB8B_10012392 Myotis brandtii Myotis_brandtii_ZBTB8B_10012392 N
Ogr05993 Ophisaurus gracilis Ogr05993 N
Pvit_17719 Pogona vitticeps Pvit_17719 N
Zbtb8b Mus musculus ENSMUSG00000048485 N
ZBTB8B Homo sapiens ENSG00000273274 N
Zbtb8b Rattus norvegicus ENSRNOG00000026898 N
zbtb8b Xenopus tropicalis XB-GENE-5788421 N
zbtb8b.S Xenopus laevis XB-GENE-5788447 N