Cagra.1671s0410 (Capsella grandiflora)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Cagra.1671s0410 T246728_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1671s0410.1.p LOB 32 130

Links

Other LOB family TFs
Other Capsella grandiflora TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29661.m000923 Ricinus communis 29661.m000923 N
Aquca_060_00005 Aquilegia coerulea Aquca_060_00005 N
cassava32963.m1 Manihot esculenta cassava32963.m1 N
cassava7505.valid.m1 Manihot esculenta cassava7505.valid.m1 N
Ca_02226 Cicer arietinum Ca_02226 N
Ca_09352 Cicer arietinum Ca_09352 N
chr2.CM0168.260.nc Lotus japonicus chr2.CM0168.260.nc N
Ciclev10025470m.g Citrus clementina Ciclev10025470m.g N
Cla014238 Citrullus lanatus Cla014238 N
Cucsa.103160 Cucumis sativus Cucsa.103160 N
Eucgr.I00704 Eucalyptus grandis Eucgr.I00704 N
evm.TU.supercontig_6.17 Carica papaya evm.TU.supercontig_6.17 N
gene05757-v1.0-hybrid Fragaria vesca gene05757-v1.0-hybrid N
GLYMA01G40180 Glycine max GLYMA01G40180 N
GLYMA05G22460 Glycine max GLYMA05G22460 N
GLYMA11G05110 Glycine max GLYMA11G05110 N
GLYMA17G17400 Glycine max GLYMA17G17400 N
Gorai.003G030400 Gossypium raimondii Gorai.003G030400 N
Gorai.007G223500 Gossypium raimondii Gorai.007G223500 N
Gorai.008G083500 Gossypium raimondii Gorai.008G083500 N
MDP0000165587 Malus domestica MDP0000165587 N
MDP0000171602 Malus domestica MDP0000171602 N
MDP0000687763 Malus domestica MDP0000687763 N
MDP0000822651 Malus domestica MDP0000822651 N
MDP0000840369 Malus domestica MDP0000840369 N
MTR_4g097080 Medicago truncatula MTR_4g097080 N
MTR_5g015490 Medicago truncatula MTR_5g015490 N
orange1.1g035867m.g Citrus sinensis orange1.1g035867m.g N
PGSC0003DMG400021444 Solanum tuberosum PGSC0003DMG400021444 N
PK04147.1 Cannabis sativa PK04147.1 N
PK11022.1 Cannabis sativa PK11022.1 N
Pm002381 Prunus mume Pm002381 N
PRUPE_ppa004454mg Prunus persica PRUPE_ppa004454mg N
SapurV1A.0461s0030 Salix purpurea SapurV1A.0461s0030 N
SapurV1A.0865s0070 Salix purpurea SapurV1A.0865s0070 N
SHR Populus trichocarpa POPTR_0012s06430 N
Solyc02g092370.1 Solanum lycopersicum Solyc02g092370.1 N
TCM_000801 Theobroma cacao TCM_000801 N