gene21008-v1.0-hybrid (Fragaria vesca)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 gene21008-v1.0-hybrid T246921_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna21008.1-v1.0-hybrid LOB 12 110

Links

Other LOB family TFs
Other Fragaria vesca TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29814.m000742 Ricinus communis 29814.m000742 N 0.859
Bo5g136860 Brassica oleracea Bo5g136860 N 0.818
Bostr.19424s1045 Boechera stricta Bostr.19424s1045 N 0.818
Bra034867 Brassica rapa Bra034867 N 0.818
Cagra.1655s0059 Capsella grandiflora Cagra.1655s0059 N 0.818
Carubv10015898m.g Capsella rubella Carubv10015898m.g N 0.818
cassava20837.m1 Manihot esculenta cassava20837.m1 N 0.848
cassava41267.m1 Manihot esculenta cassava41267.m1 N 0.889
Ca_12464 Cicer arietinum Ca_12464 N 0.828
chr6.LjB02K20.190.nd Lotus japonicus chr6.LjB02K20.190.nd N 0.848
Ciclev10032862m.g Citrus clementina Ciclev10032862m.g N 0.879
Cucsa.136740 Cucumis sativus Cucsa.136740 N 0.895
Eucgr.G03078 Eucalyptus grandis Eucgr.G03078 N 0.889
evm.TU.supercontig_19.151 Carica papaya evm.TU.supercontig_19.151 N 0.899
evm.TU.supercontig_331.6 Carica papaya evm.TU.supercontig_331.6 I 0.702
GLYMA02G43220 Glycine max GLYMA02G43220 N 0.869
GLYMA11G35500 Glycine max GLYMA11G35500 N 0.869
GLYMA14G06270 Glycine max GLYMA14G06270 N 0.869
GLYMA18G02910 Glycine max GLYMA18G02910 N 0.879
Gorai.011G291500 Gossypium raimondii Gorai.011G291500 N 0.889
Gorai.013G016900 Gossypium raimondii Gorai.013G016900 N 0.859
LBD21 Vitis vinifera VIT_13s0067g01450 N 0.899
LBD21 Arabidopsis lyrata fgenesh2_kg.3__1152__AT3G11090.1 N 0.818
LBD21 Arabidopsis thaliana AT3G11090 N 0.818
LjSGA_139647.1 Lotus japonicus LjSGA_139647.1 N 0.821
Lus10028986.g Linum usitatissimum Lus10028986.g N 0.879
MDP0000220708 Malus domestica MDP0000220708 N 0.848
MDP0000943252 Malus domestica MDP0000943252 N 0.838
mgf019866m Mimulus guttatus mgf019866m N 0.838
MTR_3g071420 Medicago truncatula MTR_3g071420 N 0.828
MTR_5g083010 Medicago truncatula MTR_5g083010 N 0.848
orange1.1g036565m.g Citrus sinensis orange1.1g036565m.g N 0.879
PGSC0003DMG400027718 Solanum tuberosum PGSC0003DMG400027718 N 0.808
PK29334.1 Cannabis sativa PK29334.1 I 0.922
Pm018957 Prunus mume Pm018957 N 0.879
POPTR_0008s07150 Populus trichocarpa POPTR_0008s07150 N 0.869
POPTR_0010s19340 Populus trichocarpa POPTR_0010s19340 N 0.889
PRUPE_ppa012284mg Prunus persica PRUPE_ppa012284mg N 0.889
SapurV1A.0061s0510 Salix purpurea SapurV1A.0061s0510 N 0.879
SapurV1A.0650s0120 Salix purpurea SapurV1A.0650s0120 N 0.869
Solyc03g095940.1 Solanum lycopersicum Solyc03g095940.1 N 0.808
TCM_042466 Theobroma cacao TCM_042466 N 0.869
Thhalv10021674m.g Eutrema salsugineum Thhalv10021674m.g N 0.828