evm.TU.supercontig_19.152 (Carica papaya)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 evm.TU.supercontig_19.152 T250670_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G05550
M06978_2.00 		Arabidopsis thaliana
HNDYCGCCGGMRWND
HNWYKCCGGCGRHND		 Dap-seq
OMalley et al.(2016)
AT5G05550_col_a 		0.845 0.706
AT5G05550
M06979_2.00 		Arabidopsis thaliana
HYNYCGCCGGARWHD
HDWYTCCGGCGRNRD		 Dap-seq
OMalley et al.(2016)
AT5G05550_colamp_a 		0.845 0.706
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_19.152 MADF 32 107

Links

Other MADF family TFs
Other Carica papaya TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GA24777 Drosophila pseudoobscura FBgn0246163 I 0.000
GD10717 Drosophila simulans FBgn0182481 I 0.000
GE19341 Drosophila yakuba FBgn0236687 I 0.000
gem Drosophila melanogaster FBgn0050011 D 0.000
GF12780 Drosophila ananassae FBgn0089814 I 0.000
GG24145 Drosophila erecta FBgn0116278 I 0.000
GH21767 Drosophila grimshawi FBgn0129228 I 0.000
GI19314 Drosophila mojavensis FBgn0142052 I 0.000
GJ22192 Drosophila virilis FBgn0209305 I 0.000
GK10687 Drosophila willistoni FBgn0212700 I 0.000
GM21189 Drosophila sechellia FBgn0176070 I 0.000
LCUP002159 Lucilia cuprina LCUP002159 N 0.000
MDOA006741 Musca domestica MDOA006741 I 0.000