AAEL010926 (Aedes aegypti)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 AAEL010926 T252751_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bs
M03915_2.00 		Drosophila melanogaster
NCCWTATAWGGN
NCCWTATAWGGN		 SELEX
Nitta et al.(2015)
bs_1 		1.000 1.000
bs
M03916_2.00 		Drosophila melanogaster
NCCWTAHAWGGH
DCCWTDTAWGGN		 SELEX
Nitta et al.(2015)
bs_2 		1.000 1.000
srfA
M02283_2.00 		Dictyostelium discoideum
MYDWWWNNRD
HYNNWWWHRK		 PBM
Weirauch et al.(2014)
pTH5539 		0.962 0.962
Srf
M00178_2.00 		Mus musculus
NNDDWWHHNN
NNDDWWHHNN		 PBM
Badis et al.(2009)
Srf_3509 		0.962 0.962
SRF
M03341_2.00 		Homo sapiens
DCCWTATATGGT
ACCATATAWGGH		 SELEX
Jolma et al.(2013)
SRF_1 		0.962 0.962
SRF
M03342_2.00 		Homo sapiens
TKHCCWTATATGGKMA
TKMCCATATAWGGDMA		 SELEX
Jolma et al.(2013)
SRF_2 		0.962 0.962
SRF
M05553_2.00 		Homo sapiens
CCNTANAWGG
CCWTNTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_HT-SELEX 		0.962 0.962
SRF
M07981_2.00 		Homo sapiens
NNNWDNCCAWAWAWGGNVD
HBNCCWTWTWTGGNHWNNN		 ChIP-seq
Gerstein et al.(2012)
GM12878_SRF_HudsonAlpha 		0.962 0.962
SRF
M07982_2.00 		Homo sapiens
CCAWATAAGGNMAD
HTKNCCTTATWTGG		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_SRF_HudsonAlpha 		0.962 0.962
SRF
M07983_2.00 		Homo sapiens
NNWNNCCAWAWAWGGNVD
HBNCCWTWTWTGGNNWNN		 ChIP-seq
Gerstein et al.(2012)
HepG2_SRF_HudsonAlpha 		0.962 0.962
SRF
M07984_2.00 		Homo sapiens
GNCCAWATADGGHMANN
NNTKDCCHTATWTGGNC		 ChIP-seq
Gerstein et al.(2012)
K562_SRF_HudsonAlpha 		0.962 0.962
SRF
M09249_2.00 		Homo sapiens
HNWBVCCAWAWAWGGNRR
YYNCCWTWTWTGGBVWND		 Misc
Kulakovskiy et al.(2013)
SRF_HUMAN.H11MO.0.A 		0.962 0.962
Srf
M09254_2.00 		Mus musculus
NWDVCCAWAWAWGGVMR
YKBCCWTWTWTGGBHWN		 Misc
Kulakovskiy et al.(2013)
SRF_MOUSE.H11MO.0.A 		0.962 0.962
Srf
M09598_2.00 		Mus musculus
CCWWATWWGGNH
DNCCWWATWWGG		 Misc
Heinz et al.(2010)
PUER-Srf_Sullivan_et_al. 		0.962 0.962
SRF
M10947_2.00 		Homo sapiens
MNBWCCWTATAWGGGCAT
ATGCCCWTATAWGGWVNK		 Transfac
Matys et al.(2006)
V$SRF_01 		0.962 0.962
SRF
M10948_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_02 		0.962 0.962
SRF
M10949_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_03 		0.962 0.962
SRF
M10950_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_09 		0.962 0.962
SRF
M10951_2.00 		Homo sapiens
DCCWTATAWGGVSHB
VDSBCCWTATAWGGH		 Transfac
Matys et al.(2006)
V$SRF_C 		0.962 0.962
SRF
M10952_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q3 		0.962 0.962
SRF
M10953_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q4 		0.962 0.962
SRF
M10954_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_01 		0.962 0.962
SRF
M10955_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_02 		0.962 0.962
SRF
M10956_2.00 		Homo sapiens
BNCCAWATAWGGVN
NBCCWTATWTGGNV		 Transfac
Matys et al.(2006)
V$SRF_Q6 		0.962 0.962
SRF
M05554_2.00 		Homo sapiens
CCNTAYAWGG
CCWTRTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_Methyl-HT-SELEX 		0.962 0.962
unc-120
M00684_2.00 		Caenorhabditis elegans
CHWAWWDGG
CCHWWTWDG		 PBM
Narasimhan et al.(2015)
pTH10822 		0.923 0.923
MCM1
M01558_2.00 		Saccharomyces cerevisiae
YNNWWNNRGN
NCYNNWWNNR		 PBM
Zhu et al.(2009)
Mcm1 		0.808 0.808
MCM1
M08589_2.00 		Saccharomyces cerevisiae
HNHTWCCBDWWHVGGAHDHN
NDHDTCCBDWWHVGGWADND		 Misc
DeBoer et al.(2011)
YMR043W_831 		0.808 0.808
MCM1
M10990_2.00 		Saccharomyces cerevisiae
WNDCCYAAWNNGGWMW
WKWCCNNWTTRGGHNW		 Transfac
Matys et al.(2006)
F$MCM1_01 		0.808 0.808
MCM1
M10991_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MCM1_02 		0.808 0.808
MCM1
M10992_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MCM1_Q6 		0.808 0.808
MCM1
M08458_2.00 		Saccharomyces cerevisiae
TTCCYRAWNNGG
CCNNWTYRGGAA		 COMPILED
Mathelier et al.(2014)
MA0331.1 		0.808 0.808
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAEL010926-PA MADS box 1 26

Links

Other MADS box family TFs
Other Aedes aegypti TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA019942 Oryza indica BGIOSGA019942 I
Bo3g004060 Brassica oleracea Bo3g004060 I
Bo9g175780 Brassica oleracea Bo9g175780 I
Bostr.13129s0288 Boechera stricta Bostr.13129s0288 I
Bostr.26959s0025 Boechera stricta Bostr.26959s0025 I
Cagra.8005s0020 Capsella grandiflora Cagra.8005s0020 I
Carubv10003744m.g Capsella rubella Carubv10003744m.g I
Ciclev10031441m.g Citrus clementina Ciclev10031441m.g I
Eucgr.G02341 Eucalyptus grandis Eucgr.G02341 I
Eucgr.K01822 Eucalyptus grandis Eucgr.K01822 I
F775_16855 Aegilops tauschii F775_16855 I
F775_24386 Aegilops tauschii F775_24386 I
GLYMA03G29825 Glycine max GLYMA03G29825 I
GLYMA19G32715 Glycine max GLYMA19G32715 I
GRMZM2G029979 Zea mays GRMZM2G029979 I
GSMUA_Achr11G14570_001 Musa acuminata GSMUA_Achr11G14570_001 I
LPERR05G14450 Leersia perrieri LPERR05G14450 I
MLOC_58614 Hordeum vulgare MLOC_58614 I
OB05G26080 Oryza brachyantha OB05G26080 I
OBART05G18270 Oryza barthii OBART05G18270 I
OGLUM05G19350 Oryza glumaepatula OGLUM05G19350 I
OLONG_005656 Oryza longistaminata OLONG_005656 I
OMERI05G15750 Oryza meridionalis OMERI05G15750 I
ONIVA05G19180 Oryza nivara ONIVA05G19180 I
orange1.1g018357m.g Citrus sinensis orange1.1g018357m.g I
ORUFI05G19430 Oryza rufipogon ORUFI05G19430 I
OS05G0443900 Oryza sativa OS05G0443900 I
PAN Arabidopsis lyrata fgenesh2_kg.2__1120__AT1G68640.1 I
Pavir.Hb01807 Panicum virgatum Pavir.Hb01807 I
PDK_20s1405291g002 Phoenix dactylifera PDK_20s1405291g002 I
PDK_20s1736691g001 Phoenix dactylifera PDK_20s1736691g001 I
PGSC0003DMG400011430 Solanum tuberosum PGSC0003DMG400011430 I
PGSC0003DMG400023678 Solanum tuberosum PGSC0003DMG400023678 I
Solyc10g078670.1 Solanum lycopersicum Solyc10g078670.1 I
Solyc10g080410.1 Solanum lycopersicum Solyc10g080410.1 I
Solyc11g068370.1 Solanum lycopersicum Solyc11g068370.1 I
TGA10 Arabidopsis lyrata fgenesh2_kg.6__632__AT5G06839.2 I
TGA10 Arabidopsis thaliana AT5G06839 D
Thhalv10014032m.g Eutrema salsugineum Thhalv10014032m.g I
Traes_1AL_3B659AABA Triticum aestivum Traes_1AL_3B659AABA I
Traes_1DS_0CFC1995D Triticum aestivum Traes_1DS_0CFC1995D I
Traes_6AS_9916DDE4D Triticum aestivum Traes_6AS_9916DDE4D I
Traes_6BS_65CDD608F Triticum aestivum Traes_6BS_65CDD608F I
Traes_6DS_FD90D1145 Triticum aestivum Traes_6DS_FD90D1145 I