Bo5g117290 (Brassica oleracea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Bo5g117290 T253127_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL103
M10918_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G18650_01 		0.761 0.761
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g117290.1 MADS box 22 67

Links

Other MADS box family TFs
Other Brassica oleracea TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29685.m000503 Ricinus communis 29685.m000503 N
29889.m003255 Ricinus communis 29889.m003255 N
Aquca_025_00175 Aquilegia coerulea Aquca_025_00175 N
BRADI5G11330 Brachypodium distachyon BRADI5G11330 N
cassava28226.m1 Manihot esculenta cassava28226.m1 N
Ciclev10004395m.g Citrus clementina Ciclev10004395m.g N
Eucgr.G00085 Eucalyptus grandis Eucgr.G00085 N
Eucgr.K03522 Eucalyptus grandis Eucgr.K03522 N
evm.TU.supercontig_151.57 Carica papaya evm.TU.supercontig_151.57 N
gene05172-v1.0-hybrid Fragaria vesca gene05172-v1.0-hybrid N
GLYMA09G04394 Glycine max GLYMA09G04394 N
GLYMA10G00380 Glycine max GLYMA10G00380 N
GLYMA15G15450 Glycine max GLYMA15G15450 N
Gorai.011G195800 Gossypium raimondii Gorai.011G195800 N
MDP0000233216 Malus domestica MDP0000233216 N
MDP0000786741 Malus domestica MDP0000786741 N
MLOC_15705 Hordeum vulgare MLOC_15705 N
orange1.1g004420m.g Citrus sinensis orange1.1g004420m.g N
PDK_20s1635961g004 Phoenix dactylifera PDK_20s1635961g004 N
PDK_20s1756181g001 Phoenix dactylifera PDK_20s1756181g001 N
PK06148.1 Cannabis sativa PK06148.1 N
PK12746.1 Cannabis sativa PK12746.1 N
Pm003854 Prunus mume Pm003854 N
Pm008290 Prunus mume Pm008290 N
POPTR_0002s20030 Populus trichocarpa POPTR_0002s20030 N
POPTR_0004s23620 Populus trichocarpa POPTR_0004s23620 N
POPTR_0008s10810 Populus trichocarpa POPTR_0008s10810 N
PRUPE_ppa002003mg Prunus persica PRUPE_ppa002003mg N
PRUPE_ppa002379mg Prunus persica PRUPE_ppa002379mg N
SapurV1A.0158s0480 Salix purpurea SapurV1A.0158s0480 N
SapurV1A.0225s0240 Salix purpurea SapurV1A.0225s0240 N
Solyc01g103180.2 Solanum lycopersicum Solyc01g103180.2 N
Solyc09g075640.2 Solanum lycopersicum Solyc09g075640.2 N
TCM_021310 Theobroma cacao TCM_021310 N
Traes_2AL_9A4A7514E Triticum aestivum Traes_2AL_9A4A7514E N
Traes_2BL_C1DE13045 Triticum aestivum Traes_2BL_C1DE13045 N
TRIUR3_11057 Triticum urartu TRIUR3_11057 N
VIT_05s0077g01400 Vitis vinifera VIT_05s0077g01400 N
VIT_07s0005g01120 Vitis vinifera VIT_07s0005g01120 N
VIT_12s0035g01360 Vitis vinifera VIT_12s0035g01360 N