CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bo9g135720
(
Brassica oleracea
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Bo9g135720
T253204_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo9g135720.1
MADS box
11
57
RITNDKTRMTTYKKRRACLYKKAGEFSTLCGVQTCIILYGATKATDE
Links
Other
MADS box
family TFs
Other
Brassica oleracea
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGL82
Arabidopsis thaliana
AT5G58890
N
0.800
AGL82
Arabidopsis lyrata
scaffold_802501.1
N
0.830
Bostr.26833s0357
Boechera stricta
Bostr.26833s0357
N
0.787
Bra002611
Brassica rapa
Bra002611
N
0.936
Cagra.0891s0086
Capsella grandiflora
Cagra.0891s0086
N
0.809
Carubv10027979m.g
Capsella rubella
Carubv10027979m.g
N
0.809
Thhalv10015500m.g
Eutrema salsugineum
Thhalv10015500m.g
N
0.830